LOCUS BC016305 1640 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens GTPase activating Rap/RanGAP domain-like 1, mRNA (cDNA
clone IMAGE:4076117), partial cds.
ACCESSION BC016305
VERSION BC016305.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1640)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1640)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: l Column: 14.
FEATURES Location/Qualifiers
source 1..1640
/db_xref="H-InvDB:HIT000088944"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4076117"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..>1640
/gene="GARNL1"
/gene_synonym="DKFZp566D133"
/gene_synonym="DKFZp667F074"
/gene_synonym="GRIPE"
/gene_synonym="TULIP1"
/db_xref="GeneID:253959"
/db_xref="HGNC:HGNC:17770"
/db_xref="MIM:608884"
CDS <1..>1640
/gene="GARNL1"
/gene_synonym="DKFZp566D133"
/gene_synonym="DKFZp667F074"
/gene_synonym="GRIPE"
/gene_synonym="TULIP1"
/codon_start=1
/product="GARNL1 protein"
/protein_id="AAH16305.1"
/db_xref="GeneID:253959"
/db_xref="HGNC:HGNC:17770"
/db_xref="MIM:608884"
/translation="GGFSAPQSEHGPRTLDNLINPPLNLQETQVTIEEITPLVPPQSG
DKGQEDLTSYFLEALLKYIVIQVKSLEWKNKENQERGFSFLFSHFKKYYLPYIFPNIC
KENSLYHPILDIPQMRPKPHYVVIKKDAETNEAIYCTKEPFIKARVIVIRWLVSFWLE
PKPHTGPHIPGMEGEVLPKNIQRAAASLVSREESKNDNADKTDRTTEPEQSHSNTSTL
TEREPSSSSLCSIDEEHLTDIEIVRRVFSSKRSNVNFVTEIFRQAFLLPICEAAAMRK
VVKVYQEWIQQEEKPLFMQEPEEIVITSSDLPCIENVTDHDISMEEGEKREEENGTNT
ADHVRNSSWAKNGSYQGALHNASEEATEQNIRAGTQAVLQVFIINSSNIFLLEPANEI
KNLLDEHTDMCKRILNIYRYMVVQVSMDKKTWEQMLLVLLRVTESVLKMPSQAFLQFQ
GKKNMTLAGRLAGPLFQTLIVAWIKANLNVYISRELWDDLLSVLSSLTYWEELATEWS
LTMETLTKVLARNLYSLDLSDLPLDKLSEQKQKKKKKK"
BASE COUNT 572 a 314 c 319 g 435 t
ORIGIN
1 gggggatttt cagcaccaca gtctgaacat ggacctcgaa ctttagataa tctcattaat
61 cctccactca accttcaaga aactcaagtc actatagaag aaatcactcc tcttgtcccc
121 ccacaatcag gagataaagg gcaagaagat ctcacaagct attttcttga agcacttcta
181 aaatacatag tcattcaggt aaaaagttta gaatggaaga acaaagaaaa ccaagaaagg
241 ggattttcat ttttgttttc acattttaag aaatattact tgccttatat ttttccaaac
301 atctgtaagg aaaacagttt atatcatcct atacttgaca tcccgcagat gagaccaaag
361 ccacattatg tcgtgataaa gaaagatgct gaaaccaatg aagcaatcta ttgtacaaag
421 gagcctttca ttaaggctcg tgttattgtc attcgttggc tggtttcttt ctggctggag
481 ccaaaaccac atacaggacc tcatattcct gggatggaag gtgaagtctt gccaaagaat
541 attcagagag cagctgctag tttagtatcc agagaagaaa gcaaaaatga taatgctgat
601 aaaacagaca gaactacaga acccgaacag tctcattcca atacaagcac tctcacggag
661 cgagaaccta gctcatctag tctctgtagt attgatgaag aacatctcac agacattgaa
721 atagttcgca gagttttttc ttctaaaagg agtaatgtaa actttgtgac agagatattt
781 cgtcaggcat ttttattacc aatttgtgaa gcagcagcta tgagaaaagt ggtaaaagta
841 tatcaagaat ggatccaaca agaggaaaaa cctttgttca tgcaagagcc tgaagaaatt
901 gtgatcactt cttcagacct cccttgcatt gaaaatgtca cagaccatga tatttcaatg
961 gaagaaggag aaaaaagaga agaggaaaat gggaccaata ctgctgatca tgttcgaaat
1021 tccagttggg caaaaaacgg ctcctaccaa ggtgctcttc ataacgcctc tgaagaagcc
1081 acagaacaaa acatacgagc tggtacccag gcagttttgc aggtgtttat tataaactca
1141 tcaaatatat ttcttcttga acctgcaaat gaaataaaaa atcttctgga tgaacacaca
1201 gatatgtgta aacgcattct taacatttat cggtacatgg ttgtacaagt atcaatggac
1261 aaaaagactt gggaacagat gctgcttgtg ttgctcagag tcacggaatc tgtactgaag
1321 atgccatcac aagcttttct acagttccaa gggaaaaaaa atatgacctt ggcaggtcga
1381 cttgcaggac cacttttcca gacccttata gttgcctgga tcaaagcaaa cctaaatgtg
1441 tacatctccc gagaactttg ggatgactta ctgtcagtat tgtcatcgct gacctattgg
1501 gaagagttgg ccactgagtg gtcactgact atggagacat taactaaagt tttagctagg
1561 aatttatata gtttggatct cagtgattta ccattggata agctgagtga acagaaacaa
1621 aaaaaaaaaa aaaaaaaaaa
//