LOCUS BC015649 2088 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens NACC family member 2, BEN and BTB (POZ) domain
containing, mRNA (cDNA clone MGC:23427 IMAGE:4654320), complete
cds.
ACCESSION BC015649
VERSION BC015649.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2088)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2088)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC015649.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: i Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42716306.
FEATURES Location/Qualifiers
source 1..2088
/db_xref="H-InvDB:HIT000037239"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23427 IMAGE:4654320"
/tissue_type="Skin, melanoma, amelanotic"
/clone_lib="NIH_MGC_41"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2088
/gene="NACC2"
/gene_synonym="BEND9"
/gene_synonym="BTBD14"
/db_xref="GeneID:138151"
/db_xref="HGNC:HGNC:23846"
CDS 142..1905
/gene="NACC2"
/gene_synonym="BEND9"
/gene_synonym="BTBD14"
/codon_start=1
/product="NACC family member 2, BEN and BTB (POZ) domain
containing"
/protein_id="AAH15649.1"
/db_xref="GeneID:138151"
/db_xref="HGNC:HGNC:23846"
/translation="MSQMLHIEIPNFGNTVLGCLNEQRLLGLYCDVSIVVKGQAFKAH
RAVLAASSLYFRDLFSGNSKSAFELPGSVPPACFQQILSFCYTGRLTMTASEQLVVMY
TAGFLQIQHIVERGTDLMFKVSSPHCDSQTAVIEDAGSEPQSPCNQLQPAAAAAAPYV
VSPSVPIPLLTRVKHEAMELPPAGPGLAPKRPLETGPRDGVAVAAGAAVAAGTAPLKL
PRVSYYGVPSLATLIPGIQQMPYPQGERTSPGASSLPTTDSPTSYHNEEDEEDDEAYD
TMVEEQYGQMYIKASGSYAVQEKPEPVPLESRSCVLIRRDLVALPASLISQIGYRCHP
KLYSEGDPGEKLELVAGSGVYITRGQLMNCHLCAGVKHKVLLRRLLATFFDRNTLANS
CGTGIRSSTSDPSRKPLDSRVLNAVKLYCQNFAPSFKESEMNVIAADMCTNARRVRKR
WLPKIKSMLPEGVEMYRTVMGSAAASVPLDPEFPPAAAQVFEQRIYAERRGDAATIVA
LRTDAVNVDLSAAANPAFDAGEEVDGAGSVIQEVAAPEPLPADGQSPPQPFEQGGGGP
SRPQTPAAAARRPEGTYAGTL"
BASE COUNT 392 a 738 c 653 g 305 t
ORIGIN
1 cggagcgccg ggacgccaag cacttcctgc cgcgggcggc gcgccgcagc tgcccaggcc
61 ggaccgggcc gggcgcccgc agatgagccc cgctagggcc gccccgcgct gagagcccag
121 ccccgccgct gcccgcccgc catgtctcag atgctgcaca tcgagatccc caacttcggg
181 aacacagtgc tgggctgcct gaacgagcag cgcctgctgg gcctctactg cgatgtgtcc
241 atcgtggtca agggccaggc cttcaaggcc caccgggcgg tgctggccgc cagcagcctc
301 tacttccgcg acctgttcag cggcaacagc aagagcgcct tcgagctgcc cggctccgtg
361 ccgcccgcct gcttccagca gatcctgtcc ttctgctaca cgggcaggct caccatgacg
421 gccagcgagc agctcgtggt catgtacacg gccggcttcc tgcagatcca gcacatcgtg
481 gagcgcggca ccgacctcat gttcaaggtg agctcgcccc actgcgactc gcagaccgct
541 gtgatcgagg acgccggctc cgagccccag agcccctgca accagctgca gccggccgcc
601 gccgccgcgg ccccctacgt cgtgtccccc tcggtgccca tcccgctgct gacccgagta
661 aagcatgaag ccatggagct gccgccggcc ggcccaggcc tggcccccaa gcgcccgctg
721 gagacggggc cccgggacgg cgtggcggtg gccgcggggg ctgcggtggc ggcgggcaca
781 gcccctctca aactgccccg tgtctcctac tacggggtgc ccagcctggc caccctcatc
841 cccggcatcc agcagatgcc ctacccccag ggggagcgga ccagtccagg cgccagcagc
901 ctgcccacca ccgacagccc cacctcgtac cacaacgagg aggacgagga ggacgacgag
961 gcctacgaca ccatggtgga ggagcagtac ggccagatgt acatcaaggc ctccggcagc
1021 tatgcagtgc aagagaagcc tgagccagtg ccgctggaga gccgctcctg cgtcctcatc
1081 cgccgcgacc tcgtggccct acctgccagc ctcatcagcc agatcggata ccgctgccat
1141 cccaagctct actcggaagg ggaccccggg gagaagctgg agctggtggc aggctctggg
1201 gtctacatca cacgcggcca gctgatgaac tgccacctgt gtgcaggggt gaagcataag
1261 gtcttgctgc ggaggctcct ggccaccttc tttgacagga acacgctggc caacagctgc
1321 gggactggca tccgctcgtc caccagcgac cccagccgga agccgctgga cagccgggtc
1381 ctgaacgctg tgaaattgta ctgtcagaac ttcgccccca gcttcaagga gagcgagatg
1441 aacgtgatcg ccgcggacat gtgcaccaac gcccgccgcg ttcgcaagcg ctggctgccc
1501 aagatcaagt ccatgctgcc ggagggcgtg gagatgtacc gcacggtcat gggctccgcc
1561 gccgccagcg tgcccctcga ccccgagttc ccgcctgccg cggcacaggt gttcgagcaa
1621 cgcatctacg ccgagcggcg gggcgacgcc gccaccatcg tggctctgag aactgacgcc
1681 gtgaatgttg acctgagtgc cgccgccaac cccgccttcg acgccggcga ggaggtggac
1741 ggggctggct cggtcatcca ggaggtggcc gcccccgagc cgctgcccgc cgatggccag
1801 agccccccac agccctttga gcagggcggg ggcggcccca gcaggcccca gacgccggcg
1861 gccgcggccc ggaggccgga gggcacctat gcagggacct tgtaagcgga gctgggtggc
1921 tgcgcgaggg accgagtact agagctgctt gcatgcgtta ctaatacaaa caaatgtgat
1981 caagccactt acctactgaa ctgctactgt tgcctgagaa aaatgtgatt tttattctgc
2041 ttgtatttaa aattgatgaa ggaaaaaaaa aaaaaaaaaa aaaaaaaa
//