LOCUS BC015542 3215 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens poliovirus receptor, mRNA (cDNA clone MGC:9603
IMAGE:3902226), complete cds.
ACCESSION BC015542
VERSION BC015542.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3215)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3215)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: o Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923371.
FEATURES Location/Qualifiers
source 1..3215
/db_xref="H-InvDB:HIT000037177"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9603 IMAGE:3902226"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3215
/gene="PVR"
/gene_synonym="CD155"
/gene_synonym="HVED"
/gene_synonym="Necl-5"
/gene_synonym="NECL5"
/gene_synonym="TAGE4"
/db_xref="GeneID:5817"
/db_xref="HGNC:HGNC:9705"
/db_xref="MIM:173850"
CDS 172..1425
/gene="PVR"
/gene_synonym="CD155"
/gene_synonym="HVED"
/gene_synonym="Necl-5"
/gene_synonym="NECL5"
/gene_synonym="TAGE4"
/codon_start=1
/product="poliovirus receptor"
/protein_id="AAH15542.1"
/db_xref="GeneID:5817"
/db_xref="HGNC:HGNC:9705"
/db_xref="MIM:173850"
/translation="MARAMAAAWPLLLVALLVLSWPPPGTGDVVVQAPTQVPGFLGDS
VTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAE
LRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEP
VPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKN
VTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTG
YNWSTTMGPLPPFAVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGPP
SEHSGMSRNAIIFLVLGILVFLILLGIGIYFYWSKCSREVLWHCHLCPSSTEHASASA
NGHVSYSAVSRENSSSQDPQTEGTR"
BASE COUNT 796 a 887 c 895 g 637 t
ORIGIN
1 cttgaagaag tgggtattcc ccttcccacc ccaggcactg gaggagcggc cccccgggga
61 ttccaggacc tgagctccgg gagctggact cgcagcgacc gcggcagagc gagctggcgc
121 cgggaagcga ggagacgccc gcgggaggcc cagctgctcg gagcaactgg catggcccga
181 gccatggccg ccgcgtggcc gctgctgctg gtggcgctac tggtgctgtc ctggccaccc
241 ccaggaaccg gggacgtcgt cgtgcaggcg cccacccagg tgcccggctt cttgggcgac
301 tccgtgacgc tgccctgcta cctacaggtg cccaacatgg aggtgacgca tgtgtcacag
361 ctgacttggg cgcggcatgg tgaatctggc agcatggccg tcttccacca aacgcagggc
421 cccagctatt cggagtccaa acggctggaa ttcgtggcag ccagactggg cgcggagctg
481 cggaatgcct cgctgaggat gttcgggttg cgcgtagagg atgaaggcaa ctacacctgc
541 ctgttcgtca cgttcccgca gggcagcagg agcgtggata tctggctccg agtgcttgcc
601 aagccccaga acacagctga ggttcagaag gtccagctca ctggagagcc agtgcccatg
661 gcccgctgcg tctccacagg gggtcgcccg ccagcccaaa tcacctggca ctcagacctg
721 ggcgggatgc ccaatacgag ccaggtgcca gggttcctgt ctggcacagt cactgtcacc
781 agcctctgga tattggtgcc ctcaagccag gtggacggca agaatgtgac ctgcaaggtg
841 gagcacgaga gctttgagaa gcctcagctg ctgactgtga acctcaccgt gtactacccc
901 ccagaggtat ccatctctgg ctatgataac aactggtacc ttggccagaa tgaggccacc
961 ctgacctgcg atgctcgcag caacccagag cccacaggct ataattggag cacgaccatg
1021 ggtcccctgc caccctttgc tgtggcccag ggcgcccagc tcctgatccg tcctgtggac
1081 aaaccaatca acacaacttt aatctgcaac gtcaccaatg ccctaggagc tcgccaggca
1141 gaactgaccg tccaggtcaa agagggacct cccagtgagc actcaggcat gtcccgtaac
1201 gccatcatct tcctggttct gggaatcctg gtttttctga tcctgctggg gatcgggatt
1261 tatttctatt ggtccaaatg ttcccgtgag gtcctttggc actgtcatct gtgtccctcg
1321 agtacagagc atgccagcgc ctcagctaat gggcatgtct cctattcagc tgtgagcaga
1381 gagaacagct cttcccagga tccacagaca gagggcacaa ggtgacagcg tcgggactga
1441 gaggggagag agactggagc tggcaaggac gtgggcctcc agagttggac ccgaccccaa
1501 tggatgaaga ccccctccaa agagaccagc ctccctccct gtgccagacc tcaaaacgac
1561 gggggcaggt gcaagttcat aggtctccaa gaccaccctc ctttcatttg ctagaaggac
1621 tcactagact caggaaagct gttaggctca cagttacagt ttattacagt aaaaggacag
1681 agattaagat cagcaaaggg aggaggtgca cagcacacgt tccacgacag atgaggcgac
1741 ggcttccatc tgccctctcc cagtggagcc atataggcag cacctgattc tcacagcaac
1801 atgtgacaac atgcaagaag tactgccaat actgccaacc agagcagctc actcgagatc
1861 tttgtgtcca gagttttttg tttgtcttga gacagggtct ggctctgttg gcagactaga
1921 gtacagtggt gagatcacag ttcattgcag ccttgacttc tcaacgccaa gtcatcctcc
1981 cacctcagcc tcctgagtag ctatgactac aggtatgtgc caccacgtct ggctaatctt
2041 tttattattt gtaaagtcga ggtttccctg tgttgcccag gctggtcttg aactcttggc
2101 tccaagtgat acttctgcct tggcctccca aagtgctgaa ttaagcagct caccatccac
2161 acggctgacc tcatacatca agccaatacc gtgtggccca agacccccac cataaatcac
2221 atcattagca tgaaccaccc agagtggccc aagactccca gatcagctac caggcaggat
2281 attccaaggg cttagagatg aatgcccagg agctgaggat aaagggcccg atctttcttt
2341 gggcaaggtt aagcctttac tgcatagcag accacacaga agggtgtggg ccaccagaga
2401 attttggtaa aaatttggcc tctggccttg agcttctaaa tctctgtatc cgtcagatct
2461 ctgtggttac aagaaacagc cactgaccct ggtcaccaga ggctgcaatt caggccgcaa
2521 gcagctgcct agggggtgtc caaggagcag agaaaactac tagatgtgaa cttgaagaag
2581 gttgtcagct gcagccactt tctgccagca tctgcagcca ctttctgcca gcatctgcag
2641 ccagcaagct gggactggca ggaaataacc cacaaaagaa gcaaatgcaa tttccaacac
2701 aagggggaag ggatgcaggg ggaggcagcg ctgcagttgc tcaggacacg ctcctatagg
2761 accaagatgg atgcgaccca agacccagga ggcccagctg ctcagtgcaa ctgacaagtt
2821 aaaaaggtct atgatcttga gggcagacag cagaattcct cttataaaga aaactgtttg
2881 ggaaaatacg ttgagggaga gaagaccttg ggccaagatg ctaaatggga atgcaaagct
2941 tgagctgctc tgcaagagaa aataagcagg acagaggatt tgctctggac agagatggaa
3001 gagccgggaa cagagaagtg tggggaagag ataggaacca gcaggatggc aggggcaaag
3061 ggctcaaggg tgaggaggcc agtgggaccc cacagagttg gggagataaa ggaacattgg
3121 ttgctttggt ggcacgtaag ctccttgtct gtctccagca cccagaatct cattaaagct
3181 tatttattgt acctccaaaa aaaaaaaaaa aaaaa
//