LOCUS BC015016 3349 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens ATG2 autophagy related 2 homolog B (S. cerevisiae), mRNA (cDNA clone IMAGE:3920437), partial cds. ACCESSION BC015016 VERSION BC015016.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3349) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3349) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC015016.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 15 Row: m Column: 4. FEATURES Location/Qualifiers source 1..3349 /db_xref="H-InvDB:HIT000036962" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3920437" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..3349 /gene="ATG2B" /db_xref="GeneID:55102" /db_xref="HGNC:HGNC:20187" CDS <1..2330 /gene="ATG2B" /codon_start=3 /product="ATG2B protein" /protein_id="AAH15016.3" /db_xref="GeneID:55102" /db_xref="HGNC:HGNC:20187" /translation="RDYVRVMDMGLLELTITAVKSDSDGEQTEPRFELHCSSDVVHIR TCSDSCAALMNLIQYIASYGDLQTPNKADMKPGAFQRRSKVDSSGRSSSRGPVLPEAD QQMLRDLMSDAMEEIDMQQGTSSVKPQANGVLDEKSQIQEPCCSDLFLFPDESGNVSQ ESGPTYASFSHHFISDAMTGVPTENDDFCILFAPKAAMQEKEEEPVIKIMVDDAIVIR DNYFSLPVNKTDTSKAPLHFPIPVIRYVVKEVSLVWHLYGGKDFGTVPPTSPAKSYIS PHSSPSHTPTRHGRNTVCGGKGRNHDFLMEIQLSKVKFQHEVYPPCKPDCDSSLSEHP VSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSNMLTVKALHVCPESGRSP QECCLRVSLMPLRLNIDQDALFFLKDFFTSLSAEVELQMTPDPEVKKSPGADVTCSLP RHLSTSKEPNLVISFSGPKQPSQNDSANSVEVVNGMEEKNFSAEEASFRDQPVFFREF RFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLSYRHGLLGVDKLFS YAITEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVRGFQR GAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGTLSIEPKKTKRFPHHRLAHQ PVDLREGVAKAYSVVKEGITDTAQTIYETAAREHESRGVTGAVGEVLRQIPPAVVKPL IVATEATSNVLGGMRNQIRPDVRQDESQKWRHGDD" BASE COUNT 973 a 663 c 776 g 937 t ORIGIN 1 gtagagatta tgttcgtgtg atggatatgg ggcttttgga gttaaccata actgcagtga 61 agtctgattc tgatggagag caaactgagc cccgctttga gttacactgt tccagcgatg 121 ttgtccatat cagaacgtgc tcagactctt gtgctgcgtt aatgaatctc attcagtaca 181 ttgcaagcta tggtgacttg cagacaccta acaaggcaga tatgaagcct ggagcctttc 241 aaagaaggtc taaggtagat tccagtggtc gatcatcctc acgtggtcca gtacttcctg 301 aagcagatca acaaatgtta cgagatctga tgagtgatgc tatggaggag atcgacatgc 361 aacaaggcac ctcgtcagta aaaccacagg ctaatggtgt tttggatgaa aaatctcaaa 421 ttcaggagcc atgttgttca gacctcttcc tgtttcctga cgagagtggg aatgtatccc 481 aggagtccgg ccccacctat gcctcattct ctcaccattt catcagtgat gcaatgacag 541 gtgtgcccac tgagaatgat gacttttgca ttctttttgc accaaaagca gccatgcagg 601 agaaggaaga agaaccagtt ataaaaatca tggttgatga tgcaattgtg ataagagaca 661 attatttcag tctgcccgtt aataagaccg atacgagcaa agccccctta cactttccca 721 ttcctgtgat tcgctatgtg gtgaaggagg tctctcttgt ctggcatctt tatggaggaa 781 aggattttgg aacagtccct cccacttctc cggctaaaag ttatattagt ccccacagtt 841 cgccttctca cacacccacg agacatggac gtaatacagt atgtggggga aaaggaagga 901 accatgactt tttaatggaa atacagctaa gcaaggtgaa gtttcagcat gaagtctacc 961 cgccatgcaa acctgattgt gattccagcc tctcagaaca cccagtctcc cggcaggtgt 1021 tcattgttca ggatcttgag attcgagatc gtttggcaac atcacaaatg aataaatttt 1081 tatacctgta ttgcagtaaa gaaatgcctc gaaaagctca ctccaacatg ttgacagtga 1141 aagccttaca cgtgtgtcca gaatctggca ggtccccaca ggagtgctgc ttgagagtgt 1201 cgctgatgcc gctccgcctc aatattgacc aggatgcttt gttcttcctg aaggatttct 1261 tcacaagtct ttctgcagaa gtagagcttc aaatgactcc agatccagaa gttaaaaagt 1321 ctcctggagc tgatgtcacc tgcagtttgc caaggcattt gagtacctca aaggagccaa 1381 atctggttat ttctttctct gggccaaaac agccttccca aaatgatagt gccaattcag 1441 tggaagtggt taatggcatg gaagagaaga acttctctgc tgaagaagca tcttttaggg 1501 atcagcctgt gttttttaga gaatttagat tcacgtcaga agttcccatt cgacttgatt 1561 atcatggcaa acatgtatca atggatcagg gtacgctagc tgggattttg attggtctgg 1621 ctcagttaaa ctgctctgaa ctaaagctca agaggctttc ctatcgacat ggtttactag 1681 gcgttgacaa attattctca tatgcaatca ctgagtggct taatgacatt aagaagaacc 1741 agctaccagg aatcctggga ggtgttggac ctatgcattc actagtacaa ttagtacaag 1801 gcctaaagga cttggtctgg ctcccaatag agcagtaccg gaaggatggc cgcattgtca 1861 gagggtttca gagaggcgct gcttcctttg gtacctcgac agcgatggct gctctagaac 1921 tcacaaacag aatggttcaa accatacagg cagctgcaga gactgcttat gatatggtgt 1981 ctcctggtac cctttctatc gagcccaaga agaccaaaag gtttcctcat caccggttag 2041 cccaccagcc agtagacctg agggaaggtg tggccaaggc ctacagtgtt gtgaaagagg 2101 gaatcacaga cacggctcag accatttatg aaactgcggc tcgagaacac gagagcagag 2161 gggtgactgg tgccgtgggc gaggttctgc gccagattcc tccggcagtg gtgaaacctc 2221 tgattgttgc cacagaagca acgtcaaacg tgctgggtgg catgagaaac caaattaggc 2281 cagatgtccg gcaagacgag tcacagaaat ggcgccacgg ggatgactga tggcttggaa 2341 ctgacagtgt gaagataagg agagtggaac caggagctca gagtcctgac agcagcttca 2401 gaggaagctc gtttaatttt attgtgctca tctcaggaac aaaagcattt tttagttaaa 2461 taatttaaca tcaaaacaac atgcaaccaa aaacttctga catttatagt tgatacttgc 2521 ctatagaaat gtttggtggc tggtgtcaaa ggtccttaaa gcatttgctg ccaagttagt 2581 ggaaggctca cttttgttaa gatgactgta attctccttg ttaccgacga gagatcattg 2641 gaagctgcct tctaacactt tgtgtagctc tgtggagttg gattttctta aggtttaaaa 2701 agaatcacag cttcggaact tttaactgaa aatgagagac agaagccaca ggggaagcaa 2761 agcaaatagg attttcaata taaatatcag tgtggaaaaa taacctattc tgttgaattt 2821 agtgttcatg catttgagaa caacattatt tccatttact ccgaaaatcc ttctgtgggg 2881 gtttgagaaa gtgaatgttg cagacatgtt ctgttgtgtt gcactttatc ctgtgtttat 2941 gtgtatgtgt ttttagatta attcaagttg tgtgctatat ttcttgtata atttacaaag 3001 ttacacaaaa tataaagagc agtaaacttg tctgaaagtt tttggcaaag gaaggtaact 3061 tcaatgtaat agcttccttt aagagtacag gaaaatgcat tctgtaatga agtggggccc 3121 atgtaattgt ttatattttc agttttaagc aggtatagtg caggcttgtt aggaatgtgt 3181 ggaagggaag attggaagtg atttttcctc ttttaaaagt aaacaaaatt cttcaaatat 3241 gccctagtta actatttcag cataccattt ttacttggtt aacagtgtac attttgataa 3301 cctatcagga atgaataaag tatttttatt taaaaaaaaa aaaaaaaaa //