LOCUS BC014620 1948 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens sorting nexin 17, mRNA (cDNA clone MGC:4075 IMAGE:3010648), complete cds. ACCESSION BC014620 VERSION BC014620.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1948) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1948) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC014620.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 10 Row: a Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23238249. FEATURES Location/Qualifiers source 1..1948 /db_xref="H-InvDB:HIT000036816" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4075 IMAGE:3010648" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1948 /gene="SNX17" /gene_synonym="KIAA0064" /db_xref="GeneID:9784" /db_xref="HGNC:HGNC:14979" /db_xref="MIM:605963" CDS 110..1522 /gene="SNX17" /gene_synonym="KIAA0064" /codon_start=1 /product="sorting nexin 17" /protein_id="AAH14620.1" /db_xref="GeneID:9784" /db_xref="HGNC:HGNC:14979" /db_xref="MIM:605963" /translation="MHFSIPETESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLH EQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFL RRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKLDLPDDLIGYF SLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAYDDDVMENR VGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYGYLRFDA CVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLPSGST SSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGGSI RKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATRESMVKLSSKLSAVSLRGIGSPSTD ASASDVHGNFAFEGIGDEDL" BASE COUNT 425 a 516 c 568 g 439 t ORIGIN 1 caaaatggcg agtgaggctg cggggactcg ctgagcagcg gagggggagc gtgcagagcc 61 gctgcggccc tcacagtccg gagcccggcc gtgccgtgcc gtagggaaca tgcacttttc 121 cattcccgaa accgagtccc gcagcgggga cagcggcggc tccgcctacg tggcctataa 181 cattcacgtg aatggagtcc tgcactgtcg ggtgcgctac agccagctcc tggggctgca 241 cgagcagctt cggaaggagt atggggccaa tgtgcttcct gcattccccc caaagaagct 301 tttctctctg actcctgctg aggtagaaca gaggagagag cagttagaga agtacatgca 361 agctgttcgg caagacccat tgcttgggag cagcgagact ttcaacagtt tcctgcgtcg 421 ggcacaacag gagacacagc aggtccccac agaggaagtg tccttggaag tgctgctcag 481 caacgggcag aaagttctgg tcaacgtgct aacttcagat cagactgagg atgtcctgga 541 ggctgtagct gcaaagctgg atcttccaga tgacttgatt ggatacttta gtctattctt 601 agttcgagaa aaagaggatg gagccttttc ttttgtacgg aagttgcaag agtttgagct 661 gccttatgtg tctgtcacca gccttcggag tcaagagtat aagattgtgc taaggaagag 721 ttattgggac tctgcctatg atgacgatgt catggagaac cgggttggcc tgaacctgct 781 ttatgctcag acggtatcag atattgagcg tgggtggatc ttggtcacca aggaacagca 841 ccggcaactc aaatctctgc aagagaaagt ctccaagaag gagttcctga gactggccca 901 gacgctgcgg cactatggct acttgcgctt tgatgcctgt gtggctgact tcccagaaaa 961 ggactgtcct gtggtggtga gcgcgggcaa cagtgagctc agcctgcagc tccgcctgcc 1021 tggccagcaa ctccgagaag gctccttccg ggtcacccgc atgcgatgct ggcgggtcac 1081 ctcctctgta ccattgccca gtggaagcac gagcagccca ggccggggcc ggggtgaggt 1141 gcgcctggaa ctggcttttg aatacctcat gagcaaggac cggctacagt gggtcaccat 1201 cactagcccc caggctatca tgatgagcat ctgcttgcag tccatggttg atgaactgat 1261 ggtgaagaaa tctggcggca gtatcaggaa gatgctgcgc cggcgggtgg ggggtactct 1321 gagacgctca gacagccagc aagcagtgaa gtccccacca ctgcttgagt cacctgatgc 1381 cacccgggag tctatggtca aactctcaag taagctgagt gccgtgagct tgcggggaat 1441 tggcagtccc agcacagatg ccagtgccag tgatgtccac ggcaatttcg ccttcgaggg 1501 cattggagat gaggatctgt aatctccact gcttggatgt ctgccctcta ccccagagga 1561 atttacagaa acttgccctg tgcctgtgtc ccccatgcta ggggcggagg ggtcttttcc 1621 ttcttctttc ctacctaccc cttttctctt ggccaggggc ctcgtatcct acctttcctt 1681 gtcccctggg ctggctgcac agaggattgc cccttctctt ttcagagctg gccctcgatg 1741 ccaaattagc atttagtatt ttgcacaaag tctaagggac catggctgcc tgccttgggg 1801 aggaaccata gctccctctg ggccgcttct ggcctcttgg agccatgggc caaaggccaa 1861 ggggatgggc agaggtctgt gtttggtctg gcccagttcc ccatcattaa actcagcctg 1921 actgctgcct aaaaaaaaaa aaaaaaaa //