LOCUS BC014041 2810 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens zinc finger, NFX1-type containing 1, mRNA (cDNA clone
IMAGE:4546448), partial cds.
ACCESSION BC014041
VERSION BC014041.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2810)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2810)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC014041.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: p Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28626520.
FEATURES Location/Qualifiers
source 1..2810
/db_xref="H-InvDB:HIT000088260"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4546448"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>2810
/gene="ZNFX1"
/db_xref="GeneID:57169"
/db_xref="HGNC:HGNC:29271"
CDS 64..>2810
/gene="ZNFX1"
/codon_start=1
/product="ZNFX1 protein"
/protein_id="AAH14041.1"
/db_xref="GeneID:57169"
/db_xref="HGNC:HGNC:29271"
/translation="MEERRPHLDARPRNSHTNHRGPVDGELPPRARNQANNPPANALR
GGASHPGRHPRANNHPAAYWQREERFRAMGRNPHQGRRNQEGHASDEARDQRHDQEND
TRWRNGNQDCRNRRPPWSNDNFQQWRTPHQKPTEQPQQAKKLGYKFLESLLQKDPSEV
VITLATSLGLKELLSHSSMKSNFLELICQVLRKACSSKMDRQSVLHVLGILKNSKFLK
VCLPAYVVGMITEPIPDIRNQYPEHISNIISLLQDLVSVFPASSVQETSMLVSLLPTS
LNALRASGVDIEEETEKNLEKVQTIIEHLQEKRREGTLRVDTYTLVQPEAEDHVESYR
TMPIYPTYNEVHLDERPFLRPNIISGKYDSTAIYLDTHFRLLREDFVRPLREGILELL
QSFEDQGLRKRKFDDIRIYFDTRIITPMCSSSGIVYKVQFDTKPLKFVRWQNSKRLLY
GSLVCMSKDNFETFLFATVSNREQEDLCRGIVQLCFNEQSQQLLAEVQPSDSFLMVET
TAYFEAYRHVLEGLQEVQEEDVPFQRNIVECNSHVKEPRYLLMGGRYDFTPLIENPSA
TGEFLRNVEGLRHPRINVLDPGQWPSKEALKLDDSQMEALQFALTRELAIIQGPPGTG
KTYVGLKIVQALLTNESVWQISLQKFPILVVCYTNHALDQFLEGIYNCQKTSIVRVGG
RSNSEILKQFTLRELRNKREFRRNLPMHLRRAYMSIMTQMKESEQELHEGAKTLECTM
RGVLREQYLQKYISPQHWESLMNGPVQDSEWICFQHWKHSMMLEWLGLGVGSFTQSVS
PAGPENTAQAEGDEEEEGEEESSLIEIAEEADLIQADRVIEEEEVVRPQRRKKEESGA
DQELAKMLLAMRLDHCGTGTAAGQEQATGEWQTQRNQKKKMKKKKKKKKKKKKKKKKK
K"
BASE COUNT 836 a 672 c 724 g 578 t
ORIGIN
1 acgcgccgga gccggttttc cagataacag aaagtaacgt gaaggaattc aggtgactca
61 gacatggagg agagaagacc tcatctggat gccaggccca ggaattccca taccaaccac
121 agaggccctg tggatggaga gttaccacca agagctagaa atcaggccaa taacccacca
181 gccaatgctc tccgaggagg agccagccac cctggaaggc atcctagggc caacaaccat
241 cctgctgctt actggcagag ggaagagaga tttagggcca tgggcaggaa cccacatcaa
301 ggaaggagga accaggaggg gcatgccagc gacgaagcta gagaccaaag acatgaccag
361 gagaatgaca ccaggtggag aaatggcaac caggactgta ggaaccgcag accaccatgg
421 tccaatgaca acttccagca gtggcggact ccccaccaga agcctacaga acagccacag
481 caggcgaaga aactgggcta caagttctta gaaagtcttc tgcagaaaga cccttctgag
541 gtggtcatca cacttgccac aagtttaggg ctgaaagagc tcctttctca ttcttccatg
601 aaatctaact tccttgagct catctgtcag gttcttcgga aggcttgtag ctccaaaatg
661 gatcgccaga gtgttctcca tgtactgggc atattgaaaa actccaaatt tctcaaagtc
721 tgcctgcctg cttatgtggt agggatgatc actgaaccca tccctgacat ccgaaaccag
781 tatccagagc acataagcaa catcatctcc ctcctccagg accttgtaag tgtcttccct
841 gccagctctg tgcaggaaac ttccatgctg gtttccctcc tgccaacctc tcttaatgct
901 ctgagagcct ctggtgttga catagaagag gaaacggaga agaacctgga aaaggtacag
961 actatcattg aacatctgca ggaaaagagg cgagagggca ctttgagagt ggatacctac
1021 actctagtgc agcctgaggc agaagaccat gttgagagct accgaaccat gcccatttac
1081 cctacctaca atgaagtgca cttggatgag aggcccttcc ttcgccccaa tatcatttct
1141 ggaaaatacg acagcactgc tatctatctg gatacccact tccggctcct gcgagaagat
1201 ttcgtcagac ctttacggga aggtattttg gaacttctcc aaagctttga agaccagggc
1261 ctgaggaaga gaaagtttga tgacatccga atctactttg acaccaggat tatcaccccc
1321 atgtgttcat catcaggcat agtctacaag gtgcagtttg acacaaaacc actgaagttt
1381 gttcgctggc agaattccaa acgattgctc tatgggtctt tggtatgcat gtccaaggac
1441 aacttcgaga catttctttt tgccaccgta tctaacaggg agcaggaaga tctctgccga
1501 ggaattgtcc agctctgctt caatgagcaa agccaacagc tgctagcaga ggtccagccc
1561 tctgactctt tcctcatggt agagacaact gcatactttg aggcctacag gcacgtcctg
1621 gaaggactcc aggaggtcca ggaggaagat gttcccttcc agaggaatat cgtggagtgt
1681 aactctcatg tgaaggagcc aaggtacttg ctaatggggg gcagatatga ctttaccccc
1741 ttaatagaga atccttcagc cactggggaa tttctaagaa atgtcgaggg tttgagacat
1801 cccagaatta atgtcttaga tcctggccag tggccctcaa aagaagccct gaagctggat
1861 gactcccaga tggaagcctt gcagtttgct ctcacaaggg aactggctat tattcaagga
1921 cctcctggaa caggcaaaac ctatgtgggt ctaaaaattg ttcaggccct cctaaccaac
1981 gagtctgttt ggcaaattag cctccagaag ttccccatct tggttgtgtg ttatactaat
2041 catgctttgg accagtttct ggaaggcatc tacaattgtc agaagaccag cattgtgcgg
2101 gtgggtggaa ggagcaacag tgaaatcctg aagcagttca ccctaaggga gctgaggaac
2161 aagcgggaat tccgccgcaa cctccccatg cacctccgaa gggcctacat gagtatcatg
2221 acacagatga aggagtcaga gcaagagctt catgaaggag ccaagaccct ggagtgcacc
2281 atgcgtggtg tcctacggga acagtacctg cagaagtaca tctcacccca gcactgggaa
2341 agtctcatga atggaccagt gcaggatagt gaatggattt gcttccagca ctggaagcat
2401 tccatgatgc tggagtggct aggtcttggt gtcggttctt tcacgcaaag tgtttctcca
2461 gcaggacctg agaatacagc ccaggcagaa ggggatgagg aggaagaagg ggaggaggag
2521 agttcgctga tagagatcgc agaggaagct gacctgattc aagcagaccg ggtgattgag
2581 gaggaagagg tggtgaggcc ccagcggcgg aagaaggaag agagtggagc agaccaggag
2641 ttggctaaaa tgcttctggc catgaggcta gaccattgtg gcactgggac agcagctgga
2701 caggagcaag ccacaggaga gtggcagacc cagcgcaacc agaaaaagaa aatgaaaaaa
2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//