LOCUS BC013600 1672 bp mRNA linear HUM 12-JAN-2006
DEFINITION Homo sapiens coiled-coil domain containing 47, mRNA (cDNA clone
IMAGE:3865335), partial cds.
ACCESSION BC013600
VERSION BC013600.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1672)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1672)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC013600.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: k Column: 10.
FEATURES Location/Qualifiers
source 1..1672
/db_xref="H-InvDB:HIT000036301"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3865335"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1672
/gene="CCDC47"
/gene_synonym="GK001"
/db_xref="GeneID:57003"
/db_xref="HGNC:HGNC:24856"
/db_xref="IMGT/GENE-DB:24856"
/db_xref="MIM:24856"
CDS <1..1079
/gene="CCDC47"
/gene_synonym="GK001"
/codon_start=3
/product="CCDC47 protein"
/protein_id="AAH13600.2"
/db_xref="GeneID:57003"
/db_xref="HGNC:HGNC:24856"
/db_xref="IMGT/GENE-DB:24856"
/db_xref="MIM:24856"
/translation="PAHLQNSWESYYLEILMVTGLLAYIMNYIIGKNKNSRLAQAWFN
THRELLESNFTLVGDDGTNKEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLRFLKR
QDLLNVLARMMRPVSDQVQIKVTMNDEDMDTYVFAVGTRKALVRLQKEMQDLSEFCSD
KPKSGAKYGLPDSLAILSEMGEVTDGMMDTKMVHFLTHYADKIESVHFSDQFSGPKIM
QEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIYSIDKAKKFRLNRE
GKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEEA
ALRREQKKLEKKQMKMKQIKVKAM"
BASE COUNT 604 a 276 c 368 g 424 t
ORIGIN
1 ttcctgcaca cctccagaac agctgggaga gttattatct agaaattttg atggtgactg
61 gtctgcttgc ttatatcatg aattacatca ttgggaagaa taaaaacagt cgccttgcac
121 aggcctggtt taacactcat agggagcttt tggagagcaa ctttacttta gtgggggatg
181 atggaactaa caaagaagcc acaagcacag gaaagttgaa ccaggagaat gagcacatct
241 ataacctgtg gtgttctggt cgagtgtgct gtgagggcat gcttatccag ctgaggttcc
301 tcaagagaca agacttactg aatgtcctgg cccggatgat gaggccagtg agtgatcaag
361 tgcaaataaa agtaaccatg aatgatgaag acatggatac ctacgtattt gctgttggca
421 cacggaaagc cttggtgcga ctacagaaag agatgcagga tttgagtgag ttttgtagtg
481 ataaacctaa gtctggagca aagtatggac tgccggactc tttggccatc ctgtcagaga
541 tgggagaagt cacagacgga atgatggata caaagatggt tcactttctt acacactatg
601 ctgacaagat tgaatctgtt catttttcag accagttctc tggtccaaaa attatgcaag
661 aggaaggtca gcctttaaag ctacctgaca ctaagaggac actgttgttt acatttaatg
721 tgcctggctc aggtaacact tacccaaagg atatggaggc actgctaccc ctgatgaaca
781 tggtgattta ttctattgat aaagccaaaa agttccgact caacagagaa ggcaaacaaa
841 aagcagataa gaaccgtgcc cgagtagaag agaacttctt gaaactgaca catgtgcaaa
901 gacaggaagc agcacagtct cggcgggagg agaaaaaaag agcagagaag gagcgaatca
961 tgaatgagga agatcctgag aaacagcgca ggctggagga ggctgcattg aggcgtgagc
1021 aaaagaagtt ggaaaagaag caaatgaaaa tgaaacaaat caaagtgaaa gccatgtaaa
1081 gccatcccag agatttgagt tctgatgcca cctgtaagct ctgaattcac aggaaacatg
1141 aaaaacgcca gtccatttct caaccttaaa tttcagacag tcttgggcaa ctgagaaatc
1201 cttatttcat catctactct gtttggggtt tggggtttta cagagattga agatacctgg
1261 aaagggctct gtttcaagaa tttttttttc cagataatca aattattttg attattttat
1321 aaaaggaatg atctatgaaa tctgtgtagg ttttaaatat tttaaaaatt ataatacaaa
1381 tcatcagtgc ttttagtact tcagtgttta aagaaatacc atgaaattta taggtagata
1441 accagattgt tgctttttgt ttaaaccaag cagttgaaat ggctataaag actgactcta
1501 aaccaagatt ctgcaaataa tgattggaat tgcacaataa acattgcttg atgttttctt
1561 gtatgtctac attaaacttg agaaaaagta aaaattagaa cactgaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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