LOCUS BC013408 1353 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens forkhead box S1, mRNA (cDNA clone MGC:4544
IMAGE:3028182), complete cds.
ACCESSION BC013408
VERSION BC013408.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1353)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1353)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC013408.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: j Column: 2.
FEATURES Location/Qualifiers
source 1..1353
/db_xref="H-InvDB:HIT000036256"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4544 IMAGE:3028182"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1353
/gene="FOXS1"
/gene_synonym="FREAC10"
/db_xref="GeneID:2307"
/db_xref="HGNC:HGNC:3735"
/db_xref="MIM:602939"
CDS 76..1068
/gene="FOXS1"
/gene_synonym="FREAC10"
/codon_start=1
/product="forkhead box S1"
/protein_id="AAH13408.1"
/db_xref="GeneID:2307"
/db_xref="HGNC:HGNC:3735"
/db_xref="MIM:602939"
/translation="MQQQPLPGPGAPTTEPTKPPYSYIALIAMAIQSSPGQRATLSGI
YRYIMGRFAFYRHNRPGWQNSIRHNLSLNECFVKVPRDDRKPGKGSYWTLDPDCHDMF
EHGSFLRRRRRFTRQTGAEGTRGPAKARRGPLRATSQDPGVPNATTGRQCSFPPELPD
PKGLSFGGLVGAMPASMCPATTDGRPRPPMEPKEISTPKPACPGELPVATSSSSCPAF
GFPAGFSEAESFNKAPTPVLSPESGIGSSYQCRLQALNFCMGADPGLEHLLASAAPSP
APPTPPGSLRAPLPLPTDHKEPWVAGGFPVQGGSGYPLGLTPCLYRTPGMFFFE"
BASE COUNT 290 a 476 c 370 g 217 t
ORIGIN
1 caggctattc cggacgccag ccctggaagc tgagcctgac ccagcaggtc ccagcagcct
61 ggcagcccgg ccagcatgca gcagcagcct ctgcccgggc ctggcgcccc cacaactgag
121 ccaaccaagc ctccctacag ctacatcgcc cttattgcta tggccatcca gagctcaccg
181 gggcagcggg ccaccctcag tggcatctac cgctacatca tgggccgatt cgccttctac
241 cgccacaacc ggcccggctg gcagaacagc atccgccaca acctgtcact caacgagtgc
301 tttgtcaagg tgccccgcga tgaccgcaag ccaggcaagg gcagctactg gacgctggac
361 cctgactgcc acgacatgtt tgagcacggc agcttcctac gccgccgccg ccgcttcacc
421 cggcagacag gtgctgaggg cacccggggc cccgccaagg cacgccgtgg acccctcagg
481 gcgaccagcc aggacccagg agtccccaac gccacgaccg gcaggcagtg ctcattccca
541 ccagagctgc cagatcccaa gggcctaagc tttgggggtc tggtgggggc catgccagcc
601 agtatgtgcc cagcaaccac tgatggcagg cctcggccac ccatggagcc caaagagatt
661 tccacgccca agcctgcatg cccaggggag ctccccgtgg ccacctcatc ttcctcatgc
721 ccagcgtttg gctttcctgc cggcttctca gaggctgaga gttttaataa ggcccctacg
781 cccgtcttgt ccccggaatc aggcatcggg agcagctacc agtgtcggct gcaggcactg
841 aatttttgca tgggggctga cccaggcctt gagcacctct tggcctcagc agccccctcc
901 cctgcaccac ccacccctcc aggctcactc cgggccccac tgcccctgcc aactgaccac
961 aaggaaccct gggttgcagg tggcttccct gtccagggag gctccggcta cccattgggg
1021 ctgaccccct gcctataccg gacgccagga atgttcttct ttgagtaaag gcagcctcac
1081 ctcgggcagt ccctgcaggt ccctcaccct ccgggctgag cctggctcta ggacctgaag
1141 aactctcgaa ggacccagcc ctggtgagcc aaggacaacc acacagaaag ccaggattga
1201 agcggtgctc agccaggccc ctggggcctc cggacaaact tgggggtgag gggaagcagg
1261 gcctcttggg atttactctg tggctctcag ggccaataaa gccatgtgat gatgagggaa
1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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