LOCUS BC012906 2563 bp mRNA linear HUM 03-NOV-2008 DEFINITION Homo sapiens nucleoporin 98kDa, mRNA (cDNA clone IMAGE:3881182), partial cds. ACCESSION BC012906 VERSION BC012906.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2563) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2563) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 21 Row: n Column: 14. FEATURES Location/Qualifiers source 1..2563 /db_xref="H-InvDB:HIT000036026" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3881182" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_68" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2563 /gene="NUP98" /gene_synonym="ADIR2" /gene_synonym="NUP196" /gene_synonym="NUP96" /db_xref="GeneID:4928" /db_xref="HGNC:HGNC:8068" /db_xref="MIM:601021" CDS <1..2260 /gene="NUP98" /gene_synonym="ADIR2" /gene_synonym="NUP196" /gene_synonym="NUP96" /codon_start=2 /product="NUP98 protein" /protein_id="AAH12906.2" /db_xref="GeneID:4928" /db_xref="HGNC:HGNC:8068" /db_xref="MIM:601021" /translation="LEESMPEDQEPVSASTHIASSLGINPHVLQIMKASLLTDEEDVD MALDQRFSRLPSKADTSQEICSPRLPISASHSSKTRSLVGGLLQSKFTSGAFLSPSVS VQECRTPRAASLMNIPSTSSCLTESPFKVHLEKLSLRQRKPDEDMKLYQTPLELKLKH STVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHL KELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGK RISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIF ALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTS DSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSDRHYDLNQLLEPRSI TADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHID NSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHMESDKH LEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETS GLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDM AKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLT QSYLRELAVGSL" BASE COUNT 672 a 672 c 585 g 634 t ORIGIN 1 gttagaagag agcatgcctg aggatcagga acctgtgtct gcctcaacac atattgcatc 61 ttcactggga attaatccac atgtcttaca gatcatgaaa gcatcattgc ttactgatga 121 agaagatgta gatatggcac tggatcaacg cttcagtcgc ctgccttcca aagcagatac 181 ttctcaagaa atctgttctc ccagactccc catttcagca tcccactcgt cgaaaactcg 241 ttcactagtt ggtgggttac tacaatcaaa atttacaagt ggagcttttc tttcaccaag 301 tgtctctgtg caagaatgtc gtactcccag agcagcatct ttaatgaata tcccatccac 361 atcctcttgc ctaactgagt ccccattcaa agttcactta gaaaaactca gtttgagaca 421 aagaaagcca gatgaagaca tgaaattata tcagacacct ctggagctca aattaaaaca 481 cagcactgtc catgtggatg aactgtgtcc tctcattgtc cccaatctgg gagttgctgt 541 cattcatgac tatgcagatt gggttaaaga agcatcagga gacttaccag aagcacaaat 601 tgtgaagcac tggagcctga catggacact atgtgaagcc ctatggggcc acctgaagga 661 gcttgacagc cagctaaatg aaccccgtga atacattcaa attctggagc gaagaagagc 721 tttctcccgc tggctatcct gtactgccac acctcagatt gaagaggaag tctccttaac 781 ccaaaaaaac agccctgtgg aggctgtatt cagctacctc acaggcaaaa ggatcagtga 841 ggcctgctct ctggcccagc agtcagggga tcatcgtctt gctcttcttt tatctcagtt 901 tgtgggtagc cagtcagtcc gggagctgct caccatgcag ttggtggact ggcatcagct 961 ccaagcagac tccttcatcc aggatgagag actgcgcatc tttgctctgt tggctggaaa 1021 accggtgtgg cagctctcag aaaagaagca aataaacgtg tgctcccagt tggattggaa 1081 acgctccctg gctatccatc tttggtattt gcttccacca acagcctcca tttctagggc 1141 gctcagcatg tatgaagaag catttcagaa tacctctgac agtgacagat atgcctgctc 1201 cccacttcct tcgtatctgg agggttctgg ctgtgtgata gcggaggagc aaaactcaca 1261 gacaccactt cgagatgtct gctttcacct tctaaaactc tacagtgaca gacattatga 1321 tctcaaccag ctgctggagc ctcgaagcat aacagcagat cctttggact accgcctaag 1381 ctggcacttg tgggaagtgc tgagggctct taactacacc catctctcag cgcagtgtga 1441 aggtgtgcta caggccagtt acgctggcca gcttgaaagt gaggggctct gggagtgggc 1501 catctttgtc ctcctgcaca ttgacaactc aggcatacgt gagaaggctg ttcgagagct 1561 gcttacccgg cactgccagc tgttggagac ccctgaatct tgggctaaag agactttcct 1621 tacccagaag ctccgtgtac ctgccaaatg gatccacgag gccaaagctg tgcgagcaca 1681 catggaatct gacaagcact tagaggccct ttgcttattt aaggctgagc actggaaccg 1741 ctgccacaag ctcatcatcc gacacttagc ttctgatgcc atcattaatg agaactatga 1801 ctacctgaag gggttcttgg aagacctggc acctccagag cgcagcagcc taattcagga 1861 ttgggaaaca tctgggcttg tttacctgga ctatattaga gtcattgaaa tgctccgcca 1921 tatacagcag gtggattgct caggtaatga cctggagcag ttacacatca aagtgacttc 1981 actgtgcagt cggatagagc agattcagtg ttacagtgct aaagatcgcc tggctcagtc 2041 agacatggcc aaacgtgtag ccaacctgct gcgcgtggtg ctgagtctgc atcatcctcc 2101 tgatagaacc tccgactcaa caccagaccc tcagcgagtc cctttgcgcc tcttggctcc 2161 ccacattggc cggcttccca tgcctgagga ctatgccatg gacgaactgc gcagccttac 2221 ccagtcctat ctgcgagaac tggctgttgg gagcctgtga gccccaggca ctttgcatca 2281 cagtcacatg cccattcaca ccacacagag gttccctgcc ttgtttggat tggcactgtt 2341 tgccattctc tgggttggct gtggcatcta ccctccctcc ctgctgccag aagcagcatc 2401 ctccacttgt tcagggcttt tcttaatact gaacgtagca taagggcttc tggaacccag 2461 aagaggagac agtttaccat cctcaagatc attcagtgtt tttcctttaa aaaaatggtc 2521 aataaagctc ctttggcaga aaaaaaaaaa aaaaaaaaaa aaa //