LOCUS BC012890 2120 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens prolactin regulatory element binding, mRNA (cDNA clone
MGC:18264 IMAGE:4158577), complete cds.
ACCESSION BC012890
VERSION BC012890.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2120)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2120)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: g Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41349447.
FEATURES Location/Qualifiers
source 1..2120
/db_xref="H-InvDB:HIT000036018"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:18264 IMAGE:4158577"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2120
/gene="PREB"
/gene_synonym="MGC3467"
/gene_synonym="SEC12"
/db_xref="GeneID:10113"
/db_xref="HGNC:HGNC:9356"
/db_xref="MIM:606395"
CDS 195..1448
/gene="PREB"
/gene_synonym="MGC3467"
/gene_synonym="SEC12"
/codon_start=1
/product="prolactin regulatory element binding"
/protein_id="AAH12890.1"
/db_xref="GeneID:10113"
/db_xref="HGNC:HGNC:9356"
/db_xref="MIM:606395"
/translation="MGRRRAPELYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNG
VHFLQLELINGRLSASLLHSHDTETRATMNLALAGDILAAGQDAHCQLLRFQAHQQQG
NKAEKAGSKEQGPRQRKGAAPAEKKCGAETQHEGLELRVENLQAVQTDFSSDPLQKVV
CFNHDNTLLATGGTDGYVRVWKVPSLEKVLEFKAHEGEIEDLALGPDGKLVTVGRDLK
ASVWQKDQLVTQLHWQENGPTFSSTPYRYQACRFGQVPDQPAGLRLFTVQIPHKRLRQ
PPPCYLTAWDGSNFLPLRTKSCGHEVVSCLDVSESGTFLGLGTVTGSVAIYIAFSLQC
LYYVREAHGIVVTDVAFLPEKGRGPELLGSHETALFSVAVDSRCQLHLLPSRRSVPVW
LLLLLCVGLIIVTILLLQSAFPGFL"
BASE COUNT 442 a 597 c 625 g 456 t
ORIGIN
1 cttggacgga gccgagctga ggctcggctt cctgctgatg gtcagggttt tggcaactcc
61 ccggtgtgag aggggtaggg agtgctcccg gcggcgacgg ggccgagttc accagccgcc
121 ggggcagtag tcgaaggccc ggcgcggcat gtcctgggtg ccgcggtgcg ggcagtgaac
181 gcgcgccggg cgggatgggc cggcgccggg cgccagagct gtaccgggct ccgttcccgt
241 tgtacgcgct tcaggtcgac cccagcactg ggctgctcat cgctgcgggc ggaggaggcg
301 ccgccaagac aggcataaag aatggcgtgc actttctgca gctagagctg attaatgggc
361 gcttgagtgc ctccttgctg cactcccatg acacagagac acgggccacc atgaacttgg
421 cactggctgg tgacatcctt gctgcagggc aggatgccca ctgtcagctc ctgcgcttcc
481 aggcacatca acagcagggc aacaaggcag agaaggccgg ttccaaggag caggggcctc
541 gacaaaggaa gggagcagcc ccagcagaga agaaatgtgg agcggaaacc cagcacgagg
601 ggctagaact cagggtagag aatttgcagg cggtgcagac agactttagc tccgatccac
661 tgcagaaagt tgtgtgcttc aaccacgata ataccctgct tgccactgga ggaacagatg
721 gctacgtccg tgtctggaag gtgcccagcc tggagaaggt tctggagttc aaagcccacg
781 aaggggagat tgaagacctg gctttagggc ctgatggcaa gttggtaacc gtgggccggg
841 accttaaggc ctctgtgtgg cagaaggatc agctggtgac acagctgcac tggcaagaaa
901 atggacccac cttttccagc acaccttacc gctaccaggc ctgcaggttt gggcaggttc
961 cagaccagcc tgctggcctg cgactcttca cagtgcaaat tccccacaag cgcctgcgcc
1021 agccccctcc ctgctacctc acagcctggg atggctccaa cttcttgccc cttcggacca
1081 agtcctgtgg ccatgaagtc gtctcctgcc tcgatgtcag tgaatccggc accttcctag
1141 gcctgggcac agtcactggc tctgttgcca tctacatagc tttctctctc cagtgcctct
1201 actacgtgag ggaggcccat ggcattgtgg tgacggatgt ggcctttcta cctgagaagg
1261 gtcgtggtcc agagctcctt gggtcccatg aaactgccct gttctctgtg gctgtggaca
1321 gtcgttgcca gctgcatctg ttgccctcac ggcggagtgt tcctgtgtgg ctcctgctcc
1381 tgctgtgtgt cgggcttatt attgtgacca tcctgctgct ccagagtgcc tttccaggtt
1441 tcctttagct tccctgcttc ctgggaatca ggagcctgga cactgccatc tctagagcag
1501 agtggaggcc tggactccct ttgctcactc cattcgggtc cacagctgag gttgcctctg
1561 acaagatgaa tgggcactgc ctgcccttct agtgaaaagg cttggctatg gccctgtgtg
1621 actccaggtc ccaggaacct tgccttcgtc atctgtggat ccatccagaa cagcggtatc
1681 tgaagcccag gccatactcc ctgcctcctt tcttctgcct accagaggct ccagagttga
1741 gcttgtcctt atctagaaac atgtgaagat gcccaagagc ctggaggcac tgctgtcctt
1801 cctgcagaaa cagtttctcc tcctcccctc agccttgtgg ccagttcctc ttcacatgaa
1861 gcccctggca tttgctgggg aagggactgg cctggtactt gctgttaggg caggaagggg
1921 caaaaggaag acttgggtag taatctgggg gttcagatgg gtagcactaa gccagctggc
1981 ctaaagatgc aataagttcc taggtagtct acccttacct tgaggaatgg gaaaatgaac
2041 ctcagcccat taggcaggaa aagttgatat ttaataaaca aggaaagagt gaactgagac
2101 cccaaaaaaa aaaaaaaaaa
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