LOCUS BC012841 1834 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens X-box binding protein 1, mRNA (cDNA clone MGC:8980 IMAGE:3856898), complete cds. ACCESSION BC012841 VERSION BC012841.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1834) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1834) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 21 Row: a Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14110394. FEATURES Location/Qualifiers source 1..1834 /db_xref="H-InvDB:HIT000035989" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8980 IMAGE:3856898" /tissue_type="Ovary, adenocarcinoma" /clone_lib="NIH_MGC_66" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1834 /gene="XBP1" /gene_synonym="TREB5" /db_xref="GeneID:7494" /db_xref="HGNC:HGNC:12801" /db_xref="MIM:194355" CDS 33..818 /gene="XBP1" /gene_synonym="TREB5" /codon_start=1 /product="X-box binding protein 1" /protein_id="AAH12841.1" /db_xref="GeneID:7494" /db_xref="HGNC:HGNC:12801" /db_xref="MIM:194355" /translation="MVVVAAAPNPADGTPKVLLLSGQPASAAGAPAGQALPLMVPAQR GASPEAASGGLPQARKRQRLTHLSPEEKALRRKLKNRVAAQTARDRKKARMSELEQQV VDLEEENQKLLLENQLLREKTHGLVVENQELRQRLGMDALVAEEEAEAKGNEVRPVAG SAESAALRLRAPLQQVQAQLSPLQNISPWILAVLTLQIQSLISCWAFWTTWTQSCSSN ALPQSLPAWRSSQRSTQKDPVPYQPPFLCQWGRHQPSWKPLMN" BASE COUNT 486 a 443 c 448 g 457 t ORIGIN 1 ggcgcgcggt gcgcggtgcg tagtctggag ctatggtggt ggtggcagcc gcgccgaacc 61 cggccgacgg gacccctaaa gttctgcttc tgtcggggca gcccgcctcc gccgccggag 121 ccccggccgg ccaggccctg ccgctcatgg tgccagccca gagaggggcc agcccggagg 181 cagcgagcgg ggggctgccc caggcgcgca agcgacagcg cctcacgcac ctgagccccg 241 aggagaaggc gctgaggagg aaactgaaaa acagagtagc agctcagact gccagagatc 301 gaaagaaggc tcgaatgagt gagctggaac agcaagtggt agatttagaa gaagagaacc 361 aaaaactttt gctagaaaat cagcttttac gagagaaaac tcatggcctt gtagttgaga 421 accaggagtt aagacagcgc ttggggatgg atgccctggt tgctgaagag gaggcggaag 481 ccaaggggaa tgaagtgagg ccagtggccg ggtctgctga gtccgcagca ctcagactac 541 gtgcacctct gcagcaggtg caggcccagt tgtcacccct ccagaacatc tccccatgga 601 ttctggcggt attgactctt cagattcaga gtctgatatc ctgttgggca ttctggacaa 661 cttggaccca gtcatgttct tcaaatgccc ttccccagag cctgccagcc tggaggagct 721 cccagaggtc tacccagaag gacccagttc cttaccagcc tccctttctc tgtcagtggg 781 gacgtcatca gccaagctgg aagccattaa tgaactaatt cgttttgacc acatatatac 841 caagccccta gtcttagaga taccctctga gacagagagc caagctaatg tggtagtgaa 901 aatcgaggaa gcacctctca gcccctcaga gaatgatcac cctgaattca ttgtctcagt 961 gaaggaagaa cctgtagaag atgacctcgt tccggagctg ggtatctcaa atctgctttc 1021 atccagccac tgcccaaagc catcttcctg cctactggat gcttacagtg actgtggata 1081 cgggggttcc ctttccccat tcagtgacat gtcctctctg cttggtgtaa accattcttg 1141 ggaggacact tttgccaatg aactctttcc ccagctgatt agtgtctaag gaatgatcca 1201 atactgttgc ccttttcctt gactattaca ctgcctggag gatagcagag aagcctgtct 1261 gtacttcatt caaaaagcca aaatagagag tatacagtcc tagagaattc ctctatttgt 1321 tcagatctca tagatgaccc ccaggtattg tcttttgaca tccagcagtc caaggtattg 1381 agacatatta ctggaagtaa gaaatattac tataattgag aactacagct tttaagattg 1441 tacttttatc ttaaaagggt ggtagttttc cctaaaatac ttattatgta agggtcatta 1501 gacaaatgtc ttgaagtaga catggaattt atgaatggtt ctttatcatt tctcttcccc 1561 ctttttggca tcctggcttg cctccagttt taggtccttt agtttgcttc tgtaagcaac 1621 gggaacacct gctgaggggg ctctttccct catgtatact tcaagtaaga tcaagaatct 1681 tttgtgaaat tatagaaatt tactatgtaa atgcttgatg gaattttttc ctgctagtgt 1741 agcttctgaa aggtgctttc tccatttatt taaaactacc catgcaatta aaaggtacaa 1801 tgcagaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //