LOCUS BC012561 1646 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens penta-EF-hand domain containing 1, mRNA (cDNA clone MGC:13412 IMAGE:4273213), complete cds. ACCESSION BC012561 VERSION BC012561.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1646) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1646) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: j Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 6912581. FEATURES Location/Qualifiers source 1..1646 /db_xref="H-InvDB:HIT000035870" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13412 IMAGE:4273213" /tissue_type="Prostate" /clone_lib="NIH_MGC_83" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1646 /gene="PEF1" /gene_synonym="PEF1A" /gene_synonym="PEFLIN" /db_xref="GeneID:553115" /db_xref="HGNC:HGNC:30009" /db_xref="MIM:610033" CDS 19..873 /gene="PEF1" /gene_synonym="PEF1A" /gene_synonym="PEFLIN" /codon_start=1 /product="penta-EF-hand domain containing 1" /protein_id="AAH12561.1" /db_xref="GeneID:553115" /db_xref="HGNC:HGNC:30009" /db_xref="MIM:610033" /translation="MASYPYRQGCPGAAGQAPGAPPGSYYPGPPNSGGQYGSGLPPGG GYGGPAPGGPYGPPAGGGPYGHPNPGMFPSGTPGGPYGGAAPGGPYGQPPPSSYGAQQ PGLYGQGGAPPNVDPEAYSWFQSVDSDHSGYISMKELKQALVNCNWSSFNDETCLMMI NMFDKTKSGRIDVYGFSALWKFIQQWKNLFQQYDRDRSGSISYTELQQALSQMGYNLS PQFTQLLVSRYCPRSANPAMQLDRFIQVCTQLQVLTEAFREKDTAVQGNIRLSFEDFV TMTASRML" BASE COUNT 376 a 465 c 430 g 375 t ORIGIN 1 ggggacgtca gaatcaccat ggccagctat ccttaccggc agggctgccc aggagctgca 61 ggacaagcac caggagcccc tccgggtagc tactaccctg gaccccccaa tagtggaggg 121 cagtatggta gtgggctacc ccctggtggt ggttatgggg gtcctgcccc tggagggcct 181 tatggaccac cagctggtgg agggccctat ggacacccca atcctgggat gttcccctct 241 ggaactccag gaggaccata tggcggtgca gctcccgggg gcccctatgg tcagccacct 301 ccaagttcct acggtgccca gcagcctggg ctttatggac agggtggcgc ccctcccaat 361 gtggatcctg aggcctactc ctggttccag tcggtggact cagatcacag tggctatatc 421 tccatgaagg agctaaagca ggccctggtc aactgcaatt ggtcttcatt caatgatgag 481 acctgcctca tgatgataaa catgtttgac aagaccaagt caggccgcat cgatgtctac 541 ggcttctcag ccctgtggaa attcatccag cagtggaaga acctcttcca gcagtatgac 601 cgggaccgct cgggctccat tagctacaca gagctgcagc aagctctgtc ccaaatgggc 661 tacaacctga gcccccagtt cacccagctt ctggtctccc gctactgccc acgctctgcc 721 aatcctgcca tgcagcttga ccgcttcatc caggtgtgca cccagctgca ggtgctgaca 781 gaggccttcc gggagaagga cacagctgta caaggcaaca tccggctcag cttcgaggac 841 ttcgtcacca tgacggcttc tcggatgcta tgacccaacc atctgtggag agtggagtgc 901 accagggacc tttcctggct tcttagagtg agagaagtat gtggacatct cttcttttcc 961 tgtccctcta gaagaacatt ctcccttgct tgatgcaaca ctgttccaaa agagggtgga 1021 gagtcctgca tcatagccac caaatagtga ggaccggggc tgaggccaca cagatagggg 1081 cctgatggag gagaggatag aagttgaatg tcctgatggc catgagcagt tgagtggcac 1141 agcctggcac caggagcagg tccttgtaat ggagttagtg tccagtcagc tgagctccac 1201 cctgatgcca gtggtgagtg ttcatcggcc tgttaccgtt agtacctgtg ttccctcacc 1261 aggccatcct gtcaaacgag cccattttct ccaaagtgga atctgaccaa gcatgagaga 1321 gatctgtcta tgggaccagt ggcttggatt ctgccacacc cataaatcct tgtgtgttaa 1381 cttctagctg cctggggctg gccctgctca gacaaatctg ctccctgggc atctttggcc 1441 aggcttctgc cctctgcagc tgggacccct cacttgcctg ccatgctctg ctcggcttca 1501 gtctccagga gacagtggtc acctctccct gccaatactt tttttaattt gcattttttt 1561 tcatttgggg ccaaaagtcc agtgaaattg taagcttcaa taaaaggatg aaactctaaa 1621 aaaaaaaaaa aaaaaaaaaa aaaaaa //