LOCUS BC012479 2719 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Fas (TNF receptor superfamily, member 6), mRNA (cDNA
clone MGC:21432 IMAGE:4514272), complete cds.
ACCESSION BC012479
VERSION BC012479.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2719)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2719)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: i Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23510419.
FEATURES Location/Qualifiers
source 1..2719
/db_xref="H-InvDB:HIT000035834"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21432 IMAGE:4514272"
/tissue_type="Bladder, transitional cell papilloma"
/clone_lib="NIH_MGC_93"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2719
/gene="FAS"
/gene_synonym="ALPS1A"
/gene_synonym="APO-1"
/gene_synonym="CD95"
/gene_synonym="FASTM"
/db_xref="GeneID:355"
/db_xref="HGNC:HGNC:11920"
/db_xref="MIM:134637"
CDS 311..1318
/gene="FAS"
/gene_synonym="ALPS1A"
/gene_synonym="APO-1"
/gene_synonym="CD95"
/gene_synonym="FASTM"
/codon_start=1
/product="Fas (TNF receptor superfamily, member 6)"
/protein_id="AAH12479.1"
/db_xref="GeneID:355"
/db_xref="HGNC:HGNC:11920"
/db_xref="MIM:134637"
/translation="MLGIWTLLPLVLTSVARLSSKSVNAQVTDINSKGLELRKTVTTV
ETQNLEGLHHDGQFCHKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCR
RCRLCDEGHGLEVEINCTRTQNTKCRCKPNFFCNSTVCEHCDPCTKCEHGIIKECTLT
SNTKCKEEGSRSNLGWLCLLLLPIPLIVWVKRKEVQKTCRKHRKENQGSHESPTLNPE
TVAINLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQ
LLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSL
V"
BASE COUNT 904 a 532 c 531 g 752 t
ORIGIN
1 agccctcccc aacccgggcg ttccccagcg aggcttcctt cccatcctcc tgaccaccgg
61 ggcttttcgt gagctcgtct ctgatctcgc gcaagagtga cacacaggtg ttcaaagacg
121 cttctgggga gtgagggaag cggtttacga gtgacttggc tggagcctca ggggcgggca
181 ctggcacgga acacaccctg aggccagccc tggctgccca ggcggagctg cctcttctcc
241 cgcgggttgg tggacccgct cagtacggag ttggggaagc tctttcactt cggaggattg
301 ctcaacaacc atgctgggca tctggaccct cctacctctg gttcttacgt ctgttgctag
361 attatcgtcc aaaagtgtta atgcccaagt gactgacatc aactccaagg gattggaatt
421 gaggaagact gttactacag ttgagactca gaacttggaa ggcctgcatc atgatggcca
481 attctgccat aagccctgtc ctccaggtga aaggaaagct agggactgca cagtcaatgg
541 ggatgaacca gactgcgtgc cctgccaaga agggaaggag tacacagaca aagcccattt
601 ttcttccaaa tgcagaagat gtagattgtg tgatgaagga catggcttag aagtggaaat
661 aaactgcacc cggacccaga ataccaagtg cagatgtaaa ccaaactttt tttgtaactc
721 tactgtatgt gaacactgtg acccttgcac caaatgtgaa catggaatca tcaaggaatg
781 cacactcacc agcaacacca agtgcaaaga ggaaggatcc agatctaact tggggtggct
841 ttgtcttctt cttttgccaa ttccactaat tgtttgggtg aagagaaagg aagtacagaa
901 aacatgcaga aagcacagaa aggaaaacca aggttctcat gaatctccaa ccttaaatcc
961 tgaaacagtg gcaataaatt tatctgatgt tgacttgagt aaatatatca ccactattgc
1021 tggagtcatg acactaagtc aagttaaagg ctttgttcga aagaatggtg tcaatgaagc
1081 caaaatagat gagatcaaga atgacaatgt ccaagacaca gcagaacaga aagttcaact
1141 gcttcgtaat tggcatcaac ttcatggaaa gaaagaagcg tatgacacat tgattaaaga
1201 tctcaaaaaa gccaatcttt gtactcttgc agagaaaatt cagactatca tcctcaagga
1261 cattactagt gactcagaaa attcaaactt cagaaatgaa atccaaagct tggtctagag
1321 tgaaaaacaa caaattcagt tctgagtata tgcaattagt gtttgaaaag attcttaata
1381 gctggctgta aatactgctt ggttttttac tgggtacatt ttatcattta ttagcgctga
1441 agagccaaca tatttgtaga tttttaatat ctcatgattc tgcctccaag gatgtttaaa
1501 atctagttgg gaaaacaaac ttcatcaaga gtaaatgcag tggcatgcta agtacccaaa
1561 taggagtgta tgcagaggat gaaagattaa gattatgctc tggcatctaa catatgattc
1621 tgtagtatga atgtaatcag tgtatgttag tacaaatgtc tatccacagg ctaaccccac
1681 tctatgaatc aatagaagaa gctatgacct tttgctgaaa tatcagttac tgaacaggca
1741 ggccactttg cctctaaatt acctctgata attctagaga ttttaccata tttctaaact
1801 ttgtttataa ctctgagaag atcatattta tgtaaagtat atgtatttga gtgcagaatt
1861 taaataaggc tctacctcaa agacctttgc acagtttatt ggtgtcatat tatacaatat
1921 ttcaattgtg aattcacata gaaaacatta aattataatg tttgactatt atatatgtgt
1981 atgcatttta ctggctcaaa actacctact tctttctcag gcatcaaaag cattttgagc
2041 aggagagtat tactagagct ttgccacctc tccatttttg ccttggtgct catcttaatg
2101 gcctaatgca cccccaaaca tggaaatatc accaaaaaat acttaatagt ccaccaaaag
2161 gcaagactgc ccttagaaat tctagcctgg tttggagata ctaactgctc tcagagaaag
2221 tagctttgtg acatgtcatg aacccatgtt tgcaatcaaa gatgataaaa tagattctta
2281 tttttccccc acccccgaaa atgttcaata atgtcccatg taaaacctgc tacaaatggc
2341 agcttataca tagcaatggt aaaatcatca tctggattta ggaattgctc ttgtcatacc
2401 cccaagtttc taagatttaa gattctcctt actactatcc tacgtttaaa tatctttgaa
2461 agtttgtatt aaatgtgaat tttaagaaat aatatttata tttctgtaaa tgtaaactgt
2521 gaagatagtt ataaactgaa gcagatacct ggaaccacct aaagaacttc catttatgga
2581 ggattttttt gccccttgtg tttggaatta taaaatatag gtaaaagtac gtaattaaat
2641 aatgtttttg gtaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2701 aaaaaaaaaa aaaaaaaaa
//