LOCUS BC012226 1232 bp mRNA linear ROD 15-JUL-2006
DEFINITION Mus musculus CD79B antigen, mRNA (cDNA clone MGC:18588
IMAGE:4164551), complete cds.
ACCESSION BC012226
VERSION BC012226.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1232)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1232)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Jeffrey E. Green, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 24 Row: e Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6680374.
FEATURES Location/Qualifiers
source 1..1232
/organism="Mus musculus"
/mol_type="mRNA"
/strain="FVB/N"
/db_xref="taxon:10090"
/clone="MGC:18588 IMAGE:4164551"
/tissue_type="Salivary gland, 10 week old female mouse"
/clone_lib="NCI_CGAP_SG2"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1232
/gene="Cd79b"
/gene_synonym="B29"
/gene_synonym="Ig-beta"
/gene_synonym="Igbeta"
/db_xref="GeneID:15985"
/db_xref="MGI:MGI:96431"
CDS 46..732
/gene="Cd79b"
/gene_synonym="B29"
/gene_synonym="Ig-beta"
/gene_synonym="Igbeta"
/codon_start=1
/product="CD79B antigen"
/protein_id="AAH12226.1"
/db_xref="GeneID:15985"
/db_xref="MGI:MGI:96431"
/translation="MATLVLSSMPCHWLLFLLLLFSGEPVPAMTSSDLPLNFQGSPCS
QIWQHPRFAAKKRSSMVKFHCYTNHSGALTWFRKRGSQQPQELVSEEGRIVQTQNGSV
YTLTIQNIQYEDNGIYFCKQKCDSANHNVTDSCGTELLVLGFSTLDQLKRRNTLKDGI
ILIQTLLIILFIIVPIFLLLDKDDGKAGMEEDHTYEGLNIDQTATYEDIVTLRTGEVK
WSVGEHPGQE"
BASE COUNT 335 a 337 c 302 g 258 t
ORIGIN
1 gtttcgcccc caaacctcct tgggctcaga gacagagcag tgaccatggc cacactggtg
61 ctgtcttcca tgccctgcca ctggctgttg ttcctgctgc tgctcttctc aggtgagccg
121 gtaccagcaa tgacaagcag tgacctgcca ctgaatttcc aaggaagccc ttgttcccag
181 atctggcagc acccgaggtt tgcagccaaa aagcggagct ccatggtgaa gtttcactgc
241 tacacaaacc actcaggtgc actgacctgg ttccgaaagc gagggagcca gcagccccag
301 gaactggtct cagaagaggg acgcattgtg cagacccaga atggctctgt ctacaccctc
361 actatccaaa acatccagta cgaggataat ggtatctact tctgcaagca gaaatgtgac
421 agcgccaacc ataatgtcac cgacagctgt ggcacggaac ttctagtctt aggattcagc
481 acgttggacc aactgaagcg gcggaacaca ctgaaagatg gcattatctt gatccagacc
541 ctcctcatca tcctcttcat cattgtgccc atcttcctgc tacttgacaa ggatgacggc
601 aaggctggga tggaggaaga tcacacctat gagggcttga acattgacca gacagccacc
661 tatgaagaca tagtgactct tcggacaggg gaggtaaagt ggtcggtagg agagcatcca
721 ggccaggaat gagggtcacc ttcatcctgc tcaactcttg ggcctcactg cttccaaacc
781 gcctggctca caagcccatt ccctgcttcc tggatacccc ggccagcgtc tgaagctgga
841 ccatcaatac cacctctcat tctagcccct ggtccccagc tcttgctgaa gggcctgggg
901 tggaaggaca atagggtggt gacatggagt aaggagttct ctggggatag acttgaccca
961 aggcttctgg gagtgccatg tgggatctgt ccccatgttt gggacaggaa agcagagact
1021 tgttggaatc tgcaaatgga ctcagaacac actggcttca agaggagtct aggaggacca
1081 tggttcacac tgacacctga agaagttgcc agaatgccat ttctctctcc cattccaagg
1141 atcacccaaa gcctacagcc catcctcctg tggaataaat aatgtgcctg acaccagaaa
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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