LOCUS BC011988 1186 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens CD9 molecule, mRNA (cDNA clone MGC:9067 IMAGE:3860667), complete cds. ACCESSION BC011988 VERSION BC011988.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1186) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1186) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 21 Row: e Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21237762. FEATURES Location/Qualifiers source 1..1186 /db_xref="H-InvDB:HIT000035585" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9067 IMAGE:3860667" /tissue_type="Ovary, adenocarcinoma" /clone_lib="NIH_MGC_66" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1186 /gene="CD9" /gene_synonym="5H9" /gene_synonym="BA2" /gene_synonym="BTCC-1" /gene_synonym="DRAP-27" /gene_synonym="GIG2" /gene_synonym="MRP-1" /gene_synonym="P24" /gene_synonym="TSPAN29" /db_xref="GeneID:928" /db_xref="HGNC:HGNC:1709" /db_xref="MIM:143030" CDS 52..738 /gene="CD9" /gene_synonym="5H9" /gene_synonym="BA2" /gene_synonym="BTCC-1" /gene_synonym="DRAP-27" /gene_synonym="GIG2" /gene_synonym="MRP-1" /gene_synonym="P24" /gene_synonym="TSPAN29" /codon_start=1 /product="CD9 molecule" /protein_id="AAH11988.1" /db_xref="GeneID:928" /db_xref="HGNC:HGNC:1709" /db_xref="MIM:143030" /translation="MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSI FEQETNNNNSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAI EIAAAIWGYSHKDEVIKEVQEFYKDTYNKLKTKDEPQRETLKAIHYALNCCGLAGGVE QFISDICPKKDVLETFTVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSTILC CAIRRNREMV" BASE COUNT 302 a 245 c 271 g 368 t ORIGIN 1 cgcgcccccc agtcccgcac ccgttcggcc caggctaagt tagccctcac catgccggtc 61 aaaggaggca ccaagtgcat caaatacctg ctgttcggat ttaacttcat cttctggctt 121 gccgggattg ctgtccttgc cattggacta tggctccgat tcgactctca gaccaagagc 181 atcttcgagc aagaaactaa taataataat tccagcttct acacaggagt ctatattctg 241 atcggagccg gcgccctcat gatgctggtg ggcttcctgg gctgctgcgg ggctgtgcag 301 gagtcccagt gcatgctggg actgttcttc ggcttcctct tggtgatatt cgccattgaa 361 atagctgcgg ccatctgggg atattcccac aaggatgagg tgattaagga agtccaggag 421 ttttacaagg acacctacaa caagctgaaa accaaggatg agccccagcg ggaaacgctg 481 aaagccatcc actatgcgtt gaactgctgt ggtttggctg ggggcgtgga acagtttatc 541 tcagacatct gccccaagaa ggacgtactc gaaaccttca ccgtgaagtc ctgtcctgat 601 gccatcaaag aggtcttcga caataaattc cacatcatcg gcgcagtggg catcggcatt 661 gccgtggtca tgatatttgg catgatcttc agtacgatct tgtgctgtgc tatccgcagg 721 aaccgcgaga tggtctagag tcagcttaca tccctgagca ggaaagttta cccatgaaga 781 ttggtgggat tttttgtttg tttgttttgt tttgtttgtt gtttgttgtt tgtttttttg 841 ccactaattt tagtattcat tctgcattgc tagataaaag ctgaagttac tttatgtttg 901 tcttttaatg cttcattcaa tattgacatt tgtagttgag cggggggttt ggtttgcttt 961 ggtttatatt ttttcagttg tttgtttttg cttgttatat taagcagaaa tcctgcaatg 1021 aaaggtacta tatttgctag actctagaca agatattgta cataaaagaa tttttttgtc 1081 tttaaataga tacaaatgtc tatcaacttt aatcaagttg taacttatat tgaagacaat 1141 ttgatacata ataaaaaatt atgacaatgt caaaaaaaaa aaaaaa //