LOCUS BC011349 2238 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens retinal G protein coupled receptor, mRNA (cDNA clone
MGC:17107 IMAGE:4157985), complete cds.
ACCESSION BC011349
VERSION BC011349.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2238)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2238)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: f Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61744450.
FEATURES Location/Qualifiers
source 1..2238
/db_xref="H-InvDB:HIT000035211"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17107 IMAGE:4157985"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2238
/gene="RGR"
/db_xref="GeneID:5995"
/db_xref="HGNC:HGNC:9990"
/db_xref="MIM:600342"
CDS 13..900
/gene="RGR"
/codon_start=1
/product="retinal G protein coupled receptor"
/protein_id="AAH11349.1"
/db_xref="GeneID:5995"
/db_xref="HGNC:HGNC:9990"
/db_xref="MIM:600342"
/translation="MAETSALPTGFGELEVLAVGMVLLVEALSGLSLNTLTIFSFCKT
PELRTPCHLLVLSLALADSGISLNALVAATSSLLRVSHRRWPYGSDGCQAHGFQGFVT
ALASICSSAAIAWGRYHHYCTRSQLAWNSAVSLVLFVWLSSAFWAALPLLGWGHYDYE
PLGTCCTLDYSKGDRNFTSFLFTMSFFNFAMPLFITITSYSLMEQKLGKSGHLQVNTT
LPARTLLLGWGPYAILYLYAVIADVTSISPKLQMVPALIAKMVPTINAINYALGNEMV
CRGIWQCLSPQKREKDRTK"
BASE COUNT 512 a 559 c 488 g 679 t
ORIGIN
1 gggagagtga ggatggcaga gaccagtgcc ttgcccaccg gcttcgggga gctcgaggtg
61 ctggctgtgg ggatggtgct actggtggaa gctctctccg gtctcagcct caataccctg
121 accatcttct ctttctgcaa gaccccggag ctgcggactc cctgccacct actggtgctg
181 agcttggctc ttgcggacag tgggatcagc ctgaatgccc tcgttgcagc cacatccagc
241 cttctccgtg tctcccacag gcgctggccc tacggctcgg acggctgcca ggctcacggc
301 ttccagggct ttgtgacagc gttggccagc atctgcagca gtgcagccat cgcatggggg
361 cgttatcacc actactgcac ccgtagccag ctggcctgga actcagccgt ctctctggtg
421 ctcttcgtgt ggctgtcttc tgccttctgg gcagctctgc cccttctggg ttggggtcac
481 tatgactatg agccactggg gacatgctgc accctggact actccaaggg ggacagaaac
541 ttcaccagct tcctcttcac catgtccttc ttcaacttcg ccatgcccct cttcatcacg
601 atcacttcct acagtctcat ggagcagaaa ctggggaaga gtggccatct ccaggtaaac
661 accactctgc cagcaaggac gctgctgctc ggctggggcc cctatgccat cctgtatcta
721 tacgcagtca tcgcagacgt gacttccatc tcccccaaac tgcagatggt gcccgccctc
781 attgccaaaa tggtgcccac gatcaatgcc atcaactatg ccctgggcaa tgagatggtc
841 tgcaggggaa tctggcagtg cctctcaccg cagaagaggg agaaggaccg aaccaagtga
901 gcctgccacc ctggagtgag ccccaggcca ggaggctgtt ccaggagtcc tgcccagcag
961 cctcggtggc caagcccaga cactcaccca ccttccccag tggccccgtg gatcctggtc
1021 ctaggctgga cacaggattc agaaagacac caggctgcac agaaagagcc agatggacct
1081 gagtgtcggt cacagccccc tacactcaag gctgagaggc ctcaggaaag tcattccttt
1141 ttaaaaataa taataaatgt aagggggtac agtgcagttt tgttacatgg atagattgcc
1201 tagtggtgaa gtctgggctt ttagtgtaac catcacccta ataatatacg ttgtacccat
1261 taagttattt ctcatccctc accccctccc accttgtcac ccttctgagt ctccaatgtc
1321 tattattcca cactccatgt ccacgtgtac acattattta gctcccactt acaagtgaga
1381 acatgtggta tttgactttc tgtttttgag ttatttcact taaaataatg acctccagtt
1441 tcatccatgt tgctgcaaaa gacatgatct cgttcttttt tatggcagtg tagtattcca
1501 ttccatatac atatataaac gttatatata tgtaacgttt tctttatcca atcatctgtt
1561 gatggataga ttccatatct ttgctactgt aaacagagct gtgataagca tacaagtgca
1621 ggtttctttt tgatatactg atttcttttc ctttgggtag ataccagtag taggactgct
1681 ggatcaaatg gtagctctat ttttaagaca gtatggagaa atcaccatac tgttttccat
1741 aggggttgta ctaatttaca gtcccaccaa cagtgtatag gtgttccctt ttctctgcat
1801 ccttaccaat atctgtaatt ttttgacttt ttaataatag ccattctcat ttgtgtgaga
1861 taaggtctca ttgtggtttt aatttccatt tctctgatga cttttgatgt taagcatttt
1921 ttcatatgct tcttagccac gtgtatgtat tctttttgaa aaaatgttta ttcatgtctt
1981 ttgcccactt tttaatggca ttatttggat tttttttgtt gagttatttg agtttcttat
2041 atattctgga taatagtctg gataatatat tctggataat atataatagt cttatatatt
2101 ctggatatat tctggataca tggtttgcaa atattttctc cggttctgca cgttgttcat
2161 tctgttgatg gtttattttg ctgtgcagaa acttttttag tttaattaag tcccatttgt
2221 ctaaaaaaaa aaaaaaaa
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