LOCUS BC010892 1307 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens COMM domain containing 9, mRNA (cDNA clone MGC:13350
IMAGE:4333615), complete cds.
ACCESSION BC010892
VERSION BC010892.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1307)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1307)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: p Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7661827.
FEATURES Location/Qualifiers
source 1..1307
/db_xref="H-InvDB:HIT000035097"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13350 IMAGE:4333615"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_62"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1307
/gene="COMMD9"
/gene_synonym="FLJ31106"
/gene_synonym="HSPC166"
/db_xref="GeneID:29099"
/db_xref="HGNC:HGNC:25014"
CDS 17..613
/gene="COMMD9"
/gene_synonym="FLJ31106"
/gene_synonym="HSPC166"
/codon_start=1
/product="COMM domain containing 9"
/protein_id="AAH10892.1"
/db_xref="GeneID:29099"
/db_xref="HGNC:HGNC:25014"
/translation="MAALTAEHFAALQSLLKASSKDVVRQLCQESFSSSALGLKKLLD
VTCSSLSVTQEEAEELLQALHRLTRLVAFRDLSSAEAILALFPENFHQNLKNLLTKII
LEHVSTWRTEAQANQISLPRLVDLDWRVDIKTSSDSISRMAVPTCLLQMKIQEDPSLC
GDKPSISAVTVELSKETLDTMLDGLGRIRDQLSAVASK"
BASE COUNT 354 a 363 c 304 g 286 t
ORIGIN
1 gggggacttc ggcaagatgg ctgccctgac agcggagcat tttgcagcac tccagagcct
61 gctcaaggcc tcctcgaaag atgttgtcag acagctgtgt caagaaagct tttccagttc
121 agcccttggc ttgaaaaaac tcttggatgt tacatgttcc agcttgtctg tgacccagga
181 ggaggcagag gaactgctcc aggctctgca ccgcctcact aggctggtgg cattccgtga
241 cctgtcctct gccgaggcaa ttctggctct ctttccagaa aatttccacc aaaacctcaa
301 aaacctgctg acaaagatca tcctagaaca tgtgtctact tggagaaccg aagcccaggc
361 aaatcagatc tctctgccac gcctggtcga tctggactgg agagtggata tcaaaacctc
421 ctcagacagc atcagccgca tggccgtccc cacctgcctg ctccagatga agatccaaga
481 agatcccagc ctatgcggag acaaaccctc catctcagct gtcaccgtgg agctgagcaa
541 agaaacactg gacaccatgt tagatggcct gggccgcatc cgagaccaac tctctgccgt
601 ggccagtaaa tgatccagcc agctgccagg gccactgcca tgacccagct gctcatgagt
661 gataaatgtc tccccatatg caggctgccc ttgcagctgc agctgacaac aggcaggatg
721 gtggggacag cagggggcta ctgccatcca gaagttacag ttggattggg aagaagcagc
781 cagatccccc gctgttctca ctcatcttct ttctctttct gaagctggag agcagaagcc
841 cccatctttg aaaagctcct gagtgcaact taattaccac catggcaggg tgagggaaca
901 tttgcatcgt cagctgcctc tgcatagctg tttgagaaat tcaggcccaa atcatgcagc
961 ctatccaata agtaagttta tttccaacat tagctctaat tagttcattt ccaatcccag
1021 aacacatgga gggaatcgga caggtgatgc cagcagttcc tgctcctctg tcagggaagc
1081 caggcagagc ccacagagca tggtccatcc agagtgttcc ctgagccccc tccaccatac
1141 tggaacccct cttcagtgta ggaagtctga aatgggtgct aattcccttc ttcatgaaac
1201 cagggccctc ttccttcatc taatgcagcc actcctaggt gaagaagtgg gaataattgg
1261 aaataaacaa cagttctaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//