LOCUS BC010868 1930 bp mRNA linear HUM 30-MAR-2004
DEFINITION Homo sapiens ATPase family, AAA domain containing 1, mRNA (cDNA
clone IMAGE:3876875), complete cds.
ACCESSION BC010868
VERSION BC010868.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1930)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1930)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (12-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: a Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14249497
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1930
/db_xref="H-InvDB:HIT000035084"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3876875"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1930
/gene="ATAD1"
/gene_synonym="FLJ14600"
/db_xref="GeneID:84896"
CDS 144..599
/gene="ATAD1"
/gene_synonym="FLJ14600"
/codon_start=1
/product="ATAD1 protein"
/protein_id="AAH10868.1"
/db_xref="GeneID:84896"
/translation="MMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTR
FHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVR
EYVNSTSEESHDEDEIRPVQQQDLHRAIEKMKKSKDAAFQNVLTHVCLD"
misc_feature 144..449
/gene="ATAD1"
/gene_synonym="FLJ14600"
/note="AAA; Region: ATPase family associated with various
cellular activities (AAA). AAA family proteins often
perform chaperone-like functions that assist in the
assembly, operation, or disassembly of protein complexes"
/db_xref="CDD:pfam00004"
BASE COUNT 608 a 305 c 368 g 649 t
ORIGIN
1 ccgataagtg gtatggagaa tctcagaaat tggctgctgc tgtcttctcc cttgccataa
61 agctacaacc atccatcatc tttatagatg aaatagactc ctttctacga aaccgttcaa
121 gttctgacca tgaagctaca gccatgatga aagctcagtt tatgagtctc tgggatggat
181 tggatactga tcacagctgc caggtcatag taatgggagc taccaatcgt cctcaggacc
241 ttgactcggc tataatgaga agaatgccta caagatttca tatcaaccag cctgctttaa
301 aacagagaga agcaatcctg aaactcatct tgaaaaatga aaatgtggat aggcatgtag
361 acctgctaga agttgcccag gaaactgatg ggttttcagg aagtgaccta aaagagatgt
421 gtcgagatgc tgccctcctc tgtgttagag aatatgttaa ttctacatca gaagaaagcc
481 atgacgaaga tgaaattcgg cctgttcaac agcaggacct gcatcgggca attgaaaaga
541 tgaagaaatc aaaggatgca gcatttcaga atgttttaac acatgtttgt ttagattaag
601 agtaaagatc atttgtacag ttcagtgatc tagtttggtg tgtcctctta tcagttagtg
661 gaaatagaac ggaaagagtg ctctttaaac aatgagggag ctcagtgttt atggttttat
721 actctgaatt ctaagttatt gagatatagt tgttacatag gtggtattac tgttggtcaa
781 aaatcatgag gaggaacagt tgaatccagc ctgaacgtgg gtgcttgtgt ttgacctttt
841 cagccatata ttgtacagcc ttatagaatc taagctggtc ttaaagtcat aaatgattca
901 ttgggtcatt agtgagaaac ggggatgtgg ttaggtgctg gttcctagac atgtgagtat
961 gcgtttgtgt gtgtgcgtgt atgtatgtgt atattaaatg tatatatcca cacattttat
1021 attgacattc tgtagatatg tttgaatata gaaacttttt ttaccccaac tactgaatcc
1081 aggagtacca aataatatat agtaaaacta agatttaagg ttgtgtcaaa aaggtacagt
1141 gattcagcca tttccatttg tcatttgttt caaccttttt taagttgagt gtttttattt
1201 ctgcagttat tagttggatc ctccacatct tgcatatata catgggctca attattatgt
1261 ttgtcaggat aatcaaatga aaatactagt tcagtgatca gcattgaatg gttgttaggc
1321 agccatgtgc tcaacactga tttcacctct tgagtataaa ctttttaaat ttaaattggt
1381 ttacatgaaa gtggattaaa aggcctttca aaagaatggg tttgaaaaac ctcagtaccc
1441 tttaatacat gtacatttct ttcctttttt catttaatgt aacatgtctg ttgtaactat
1501 gtttcttaaa tattatttta aggttatgtg ttctttaatt atggtcaaat ataatttggt
1561 caccaaaaat gaaataatag tttaaaacaa gtagctgtta ctaagtgtgc taaaaatact
1621 cattttataa ttaattttag ttttcttagt atattattat aaattgtgcc ctaagtcagg
1681 tacaaatgta cacatcaaaa tgcccatatt gtatctatct gtagtcgttt aatgtgaatt
1741 atatgtgaat ttttttcaaa attttactaa ccagaattct gttataggca cctaaccacg
1801 cagcatgagg aaaacggcac aacacaatct tgaggtgcct tctgaatcat cagattaaat
1861 tatgcttcat atgtttttgc ttttactgta tttctttaaa aactctaaat ctttaaaaaa
1921 aaaaaaaaaa
//