LOCUS BC010108 1647 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chromatin modifying protein 6, mRNA (cDNA clone MGC:19477 IMAGE:3604039), complete cds. ACCESSION BC010108 VERSION BC010108.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1647) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1647) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 19, 2003 this sequence version replaced BC010108.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 27 Row: e Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 52851447. FEATURES Location/Qualifiers source 1..1647 /db_xref="H-InvDB:HIT000034806" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19477 IMAGE:3604039" /tissue_type="Uterus, endometrium adenocarcinoma" /clone_lib="NIH_MGC_44" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1647 /gene="CHMP6" /gene_synonym="FLJ11749" /gene_synonym="VPS20" /db_xref="GeneID:79643" /db_xref="HGNC:HGNC:25675" CDS 25..630 /gene="CHMP6" /gene_synonym="FLJ11749" /gene_synonym="VPS20" /codon_start=1 /product="chromatin modifying protein 6" /protein_id="AAH10108.1" /db_xref="GeneID:79643" /db_xref="HGNC:HGNC:25675" /translation="MGNLFGRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERE RALARQLLRDGRKERAKLLLKKKRYQEQLLDRTENQISSLEAMVQSIEFTQIEMKVME GLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQEDEDAILEEL SAITQEQIELPEVPSEPLPEKIPENVPVKARPRQAELVAAS" BASE COUNT 350 a 510 c 521 g 266 t ORIGIN 1 cccgggccag gggcgggcgc cgccatgggt aacctgttcg gccgcaagaa gcagagccgc 61 gtcacggagc aggacaaggc catcctgcaa ctgaagcagc agcgggacaa gctgaggcag 121 taccagaaga ggatcgccca gcagctggag cgcgagcgcg ccctggcccg gcagctgctg 181 cgggacggca ggaaggaacg ggccaagctg ctgctcaaga agaagcgata ccaggagcag 241 ctcctggaca ggacggagaa ccagatcagc agcctggagg ccatggttca gagtattgag 301 ttcacccaga tcgaaatgaa agtgatggag gggctgcagt ttggaaatga gtgtctgaac 361 aagatgcacc aggtgatgtc cattgaagag gtggagagga tcctggacga gacgcaggag 421 gccgtggagt accagcggca aatagacgag ctcctggcag gaagcttcac tcaggaggat 481 gaagacgcca tcctggagga gctgagcgca atcactcagg aacaaataga gctgccagag 541 gttccctccg agccccttcc tgagaagatc ccagaaaacg tccctgtcaa ggccaggccc 601 aggcaggcgg agctggtggc agcttcgtaa cgtggcctcg tcttgtggga ctcacgggga 661 tgccccaggg actgtggccc acagagagtt tgggtcacgg ccagcccctg accgggttcc 721 ctggagccca gtgcgcacgg tgctgagcag agctgcagcc acgcaggcgc attgcaggag 781 gactccagag cgtctcctgg agaccttgag cctgaacgca ctcaggcgcc actggcctgc 841 tctcagtccg gattaactct cgaccgagcc cagcttctgc cggttgtggg ctcccccggt 901 ggccgaggcc caggcccaac gcctctggtg ctgttcccct gcagtcccag ccccgcgtgg 961 ctcgcgctcg tctgtgagga agacacctcc agaccttggg gtccccgcgc ttcctcttgc 1021 tcctcgctgc tcccattagc tggtgcaggc ttccgttaag gggtccctcc cttggcctgg 1081 cttcccggcg cacctcagct tccctgctgg tggggggatc cccaggagac cagcatgtgc 1141 tgaacctctc cgtgcctctg cctccgcacc ctagacaccc acctccagtt tgaaggtggc 1201 gggccagggg ctttcttgct gaattgacga ctccgagagc cctgactccc gccttgccac 1261 tcacggctct gtccactagg gctcagccct gctgagaaag gacctccgat gcttgggaga 1321 cgctgctccg gcaggtgcag ccccggaagt ttgtccatgg gggtccccgc ggctggggct 1381 catggaactg cgagacccgg gaccctcctg ccctgcgggt ccccgagcca ccagcagcca 1441 ggaccggagg ctgtggggca tggcgtgact tctcgtgcac agggctggtt tggttatgag 1501 acgatctcgc tgggaccgcc cctgcccgtg gaaagccaca aggacaaagg gagcggccac 1561 ctcgaccccc agacagggcg gcccgtatta aagttggccc tgcacgccca aaaaaaaaaa 1621 aaaaaaaaaa aaaaaaaaaa aaaaaaa //