LOCUS BC010031 2226 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zyxin, mRNA (cDNA clone MGC:19690 IMAGE:3506023),
complete cds.
ACCESSION BC010031
VERSION BC010031.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2226)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2226)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC010031.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: c Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..2226
/db_xref="H-InvDB:HIT000034751"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19690 IMAGE:3506023"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2226
/gene="ZYX"
/gene_synonym="ESP-2"
/gene_synonym="HED-2"
/db_xref="GeneID:7791"
/db_xref="HGNC:HGNC:13200"
/db_xref="MIM:602002"
CDS 56..1774
/gene="ZYX"
/gene_synonym="ESP-2"
/gene_synonym="HED-2"
/codon_start=1
/product="zyxin"
/protein_id="AAH10031.1"
/db_xref="GeneID:7791"
/db_xref="HGNC:HGNC:13200"
/db_xref="MIM:602002"
/translation="MAAPRPSPAISVSVSAPAFYAPQKKFGPVVAPKPKVNPFRPGDS
EPPPAPGAQRAQMGRVGEIPPPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPIEE
SFPPAPLEEEIFPSPPPPPEEEGGPEAPIPPPPQPREKVSSIDLEIDSLSSLLDDMTK
NDPFKARVSSGYVPPPVATPFSSKSSTKPAAGGTAPLPPWKSPSSSQPLPQVPAPAQS
QTQFHVQPQPQPKPQVQLHVQSQTQPVSLANTQPRGPPASSPAPAPKFSPVTPKFTPV
ASKFSPGAPGGSGSQPNQKLGHPEALSAGTGSPQPPSFTYAQQREKPRVQEKQHPVPP
PAQNQNQVRSPGAPGPLTLKEVEELEQLTQQLMQDMEHPQRQNVAVNELCGRCHQPLA
RAQPAVRALGQLFHIACFTCHQCAQQLQGQQFYSLEGAPYCEGCYTDTLEKCNTCGEP
ITDRMLRATGKAYHPHCFTCVVCARPLEGTSFIVDQANRPHCVPDYHKQYAPRCSVCS
EPIMPEPGRDETVRVVALDKNFHMKCYKCEDCGKPLSIEADDNGCFPLDGHVLCRKCH
TARAQT"
BASE COUNT 430 a 811 c 589 g 396 t
ORIGIN
1 ggcggccacc cgagacgcgg cgcgcacgct ccggcctgcg cagcccggcc cggccatggc
61 ggccccccgc ccgtctcccg cgatctccgt ttcggtctcg gctccggctt tttacgcccc
121 gcagaagaag ttcggccctg tggtggcccc aaagcccaaa gtgaatccct tccggcccgg
181 ggacagcgag cctcccccgg cacccggggc ccagcgcgca cagatgggcc gggtgggcga
241 gattcccccg ccgcccccgg aagactttcc cctgcctcca cctccccttg ctggggatgg
301 cgacgatgca gagggtgctc tgggaggtgc cttcccgccg ccccctcccc cgatcgagga
361 atcatttccc cctgcgcctc tggaggagga gatcttccct tccccgccgc ctcctccgga
421 ggaggaggga gggcctgagg cccccatacc gcccccacca cagcccaggg agaaggtgag
481 cagtattgat ttggagatcg actctctgtc ctcactgctg gatgacatga ccaagaatga
541 tcctttcaaa gcccgggtgt catctggata tgtgccccca ccagtggcca ctccattcag
601 ttccaagtcc agtaccaagc ctgcagccgg gggcacagca cccctgcctc cttggaagtc
661 cccttccagc tcccagcctc tgccccaggt tccggctccg gctcagagcc agacacagtt
721 ccatgttcag ccccagcccc agcccaagcc tcaggtccaa ctccatgtcc agtcccagac
781 ccagcctgtg tctttggcta acacccagcc ccgagggccc ccagcctcat ctccggctcc
841 agcccctaag ttttctccag tgactcctaa gtttactcct gtggcttcca agttcagtcc
901 tggagcccca ggtggatctg ggtcacaacc aaatcaaaaa ttggggcacc ccgaagctct
961 ttctgctggc acaggctccc ctcaacctcc cagcttcacc tatgcccagc agagggagaa
1021 gccccgagtg caggagaagc agcaccccgt gcccccaccg gctcagaacc aaaaccaggt
1081 gcgctcccct ggggccccag ggcccctgac tctgaaggag gtggaggagc tggagcagct
1141 gacccagcag ctaatgcagg acatggagca tcctcagagg cagaatgtgg ctgtcaacga
1201 actctgcggc cgatgccatc aacccctggc ccgggcgcag ccagccgtcc gcgctctagg
1261 gcagctgttc cacatcgcct gcttcacctg ccaccagtgt gcgcagcagc tccagggcca
1321 gcagttctac agtctggagg gggcgccgta ctgcgagggc tgttacactg acaccctgga
1381 gaagtgtaac acctgcgggg agcccatcac tgaccgcatg ctgagggcca cgggcaaggc
1441 ctatcacccg cactgcttca cctgtgtggt ctgcgcccgc cccctggagg gcacctcctt
1501 catcgtggac caggccaacc ggccccactg tgtccccgac taccacaagc agtacgcccc
1561 gaggtgctcc gtctgctctg agcccatcat gcctgagcct ggccgagatg agactgtgcg
1621 agtggtcgcc ctggacaaga acttccacat gaagtgttac aagtgtgagg actgcgggaa
1681 gcccctgtcg attgaggcag atgacaatgg ctgcttcccc ctggacggtc acgtgctctg
1741 tcggaagtgc cacactgcta gagcccagac ctgagtgagg acaggccctc ttcagaccgc
1801 agtccatgcc ccattgtgga ccacccacac tgagaccacc tgcccccacc tcagttattg
1861 ttttgatgtc tagcccctcc catttccaac ccctccctag catcccaggt gccctgaccc
1921 aggacccaac atggtctagg gatgcaggat ccccgccctg gggtctggtc ctcgcccatc
1981 ctgcagggat tgcccaccgt cttccagaca ccccacctga ggggggcacc agatttagtg
2041 ctgctgcttt cactgctgca cccgcgccct cggccggccc cccgagcagc ctttgtactc
2101 tgcttgcgga gggctgggag accctccagg acattcccac cctcccccat gctgccaagt
2161 tgtagctata gctacaaata aaaaaaaacc ttgttttcca gaaaaaaaaa aaaaaaaaaa
2221 aaaaaa
//