LOCUS BC010007 2394 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger and BTB domain containing 5, mRNA (cDNA
clone MGC:15172 IMAGE:4300173), complete cds.
ACCESSION BC010007
VERSION BC010007.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2394)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2394)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC010007.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: n Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7662073.
FEATURES Location/Qualifiers
source 1..2394
/db_xref="H-InvDB:HIT000034733"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15172 IMAGE:4300173"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2394
/gene="ZBTB5"
/db_xref="GeneID:9925"
/db_xref="HGNC:HGNC:23836"
CDS 45..2078
/gene="ZBTB5"
/codon_start=1
/product="zinc finger and BTB domain containing 5"
/protein_id="AAH10007.1"
/db_xref="GeneID:9925"
/db_xref="HGNC:HGNC:23836"
/translation="MDFPGHFEQIFQQLNYQRLHGQLCDCVIVVGNRHFKAHRSVLAA
CSTHFRALFSVAEGDQTMNMIQLDSEVVTAEAFAALIDMMYTSTLMLGESNVMDVLLA
ASHLHLNSVVKACKHYLTTRTLPMSPPSERVQEQSARMQRSFMLQQLGLSIVSSALNS
SQNGEEQPAPMSSSMRSNLDQRTPFPMRRLHKRKQSAEERARQRLRPSIDESAISDVT
PENGPSGVHSREEFFSPDSLKIVDNPKADGMTDNQEDSAIMFDQSFGTQEDAQVPSQS
DNSAGNMAQLSMASRATQVETSFDQEAAPEKSSFQCENPEVGLGEKEHMRVVVKSEPL
SSPEPQDEVSDVTSQAEGSESVEVEGVVVSAEKIDLSPESSDRSFSDPQSSTDRVGDI
HILEVTNNLEHKSTFSISNFLNKSRGNNFTANQNNDDNIPNTTSDCRLESEAPYLLSP
EAGPAGGPSSAPGSHVENPFSEPADSHFVRPMQEVMGLPCVQTSGYQGGEQFGMDFSR
SGLGLHSSFSRVMIGSPRGGASNFPYYRRIAPKMPVVTSVRSSQIPENSTSSQLMMNG
ATSSFENGHPSQPGPPQLTRASADVLSKCKKALSEHNVLVVEGARKYACKICCKTFLT
LTDCKKHIRVHTGEKPYACLKCGKRFSQSSHLYKHSKTTCLRWQSSNLPSTLL"
BASE COUNT 627 a 584 c 611 g 572 t
ORIGIN
1 cctccttcag cgaggaggag gggggcggag cccgactcag gatcatggat tttcctggtc
61 actttgaaca aatcttccag cagctgaact accagagact tcatggccag ctctgtgatt
121 gtgtcattgt agtggggaat agacacttta aagcccaccg ctccgtgctg gcagcatgca
181 gcacgcattt ccgagccctg ttctcagtgg cagaaggaga tcagaccatg aacatgatcc
241 agctggatag cgaggtggtg acagcagagg cctttgctgc actgattgac atgatgtata
301 cctccaccct catgctgggg gagagcaatg taatggatgt cttattggca gcctctcacc
361 tgcatttgaa ctctgttgtt aaggcatgta aacattactt aacgacaagg acgctgccca
421 tgtctccccc cagtgagcgc gttcaggagc agagcgcccg catgcagcgc tcctttatgc
481 tacagcagct gggactaagc atcgtgagct cagccctcaa ttccagccag aatggcgagg
541 agcagccagc ccccatgagc tcttccatgc gcagtaacct ggatcagcgc acgcccttcc
601 ccatgagacg ccttcataag cgcaagcagt ctgcagagga gcgggccagg cagcgcctcc
661 gaccctccat agatgagtct gccatttcag atgttacacc ggagaatggg ccttcagggg
721 ttcattctcg ggaggagttc ttttcaccag attctctgaa aattgtggat aatcctaaag
781 ctgacggaat gactgataac caggaagata gtgcgatcat gtttgatcag tcttttggca
841 ctcaagaaga tgcccaggtg cccagccagt ctgataacag tgctggcaac atggcacagt
901 tgtccatggc ctctcgtgca actcaggttg agactagttt tgatcaggaa gctgcacctg
961 agaaaagtag ttttcagtgt gaaaaccctg aggttggcct tggtgagaag gagcacatga
1021 gagtggtggt taaatctgag cccctgagct cacctgagcc tcaggatgaa gtgagcgatg
1081 tgacctcaca agcagaaggc agcgagtctg tggaagtgga aggagttgtg gtcagtgccg
1141 agaagataga cctcagccct gaaagcagtg atcggagttt ttcagatccc cagtctagca
1201 cagacagggt aggtgatatc catattttgg aagtcacaaa taacctagag cataagtcca
1261 cttttagtat ttcgaatttt cttaacaaga gcagaggaaa taactttact gcaaatcaga
1321 acaatgatga taatattcca aacaccacta gtgactgcag gctggagagt gaggccccct
1381 atttgttgag tccagaggct gggcctgcag gtgggccctc ctctgcccct ggctcccatg
1441 tagagaaccc atttagtgaa cctgcagact cccacttcgt caggcctatg caggaggtga
1501 tgggcctgcc gtgtgtgcag acttcaggct accaaggagg agaacagttt gggatggact
1561 tttccaggtc tggtttgggc ctccactcct ccttctccag ggtaatgata ggttccccaa
1621 ggggaggagc cagtaacttt ccttactacc gccgcatagc tcccaaaatg ccagttgtaa
1681 cttccgtcag gagctcacag atcccagaaa actctaccag ttctcagcta atgatgaatg
1741 gagctacgtc ctcatttgaa aatggccatc cttcccagcc tggccctcca cagttgacca
1801 gggcatctgc agatgttctg tcaaagtgca agaaggcctt atcagagcac aatgttttgg
1861 ttgtagaggg agctcgcaag tatgcctgca aaatctgctg caaaactttt ctgactttga
1921 cagattgcaa gaagcacatc cgtgttcaca caggtgaaaa gccttacgcc tgcctgaagt
1981 gtggcaagag gtttagtcag tccagccacc tgtataagca ctcaaagact acctgcctgc
2041 gctggcagag cagcaatctt cccagcactt tgctctagct gtttgtcctt acaagacaac
2101 gctgaggcca gttgtcagac tgaatttctt ttggtaagca gttaatgcct ttgggttcga
2161 ggcttccagc tgcccagtgg ctcttaaaca gtttagcaac taataaccgg agaactaaca
2221 tgtagtattt gtgctgctgc atttctgagt gaagtgcacg tcttgggaaa gggatgcaat
2281 ccctgaaacc aggtgcttcc ttggggttga gtaatgcagt cagaaagtag tttgtaattg
2341 atattaaaag tggccccttt taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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