LOCUS BC009280 1159 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger, DHHC-type containing 12, mRNA (cDNA clone
MGC:13153 IMAGE:4302257), complete cds.
ACCESSION BC009280
VERSION BC009280.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1159)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1159)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC009280.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: n Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42516559.
FEATURES Location/Qualifiers
source 1..1159
/db_xref="H-InvDB:HIT000034252"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13153 IMAGE:4302257"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1159
/gene="ZDHHC12"
/gene_synonym="FLJ14524"
/gene_synonym="MGC13153"
/gene_synonym="MGC54050"
/gene_synonym="ZNF400"
/db_xref="GeneID:84885"
/db_xref="HGNC:HGNC:19159"
CDS 14..817
/gene="ZDHHC12"
/gene_synonym="FLJ14524"
/gene_synonym="MGC13153"
/gene_synonym="MGC54050"
/gene_synonym="ZNF400"
/codon_start=1
/product="zinc finger, DHHC-type containing 12"
/protein_id="AAH09280.1"
/db_xref="GeneID:84885"
/db_xref="HGNC:HGNC:19159"
/translation="MAPWALLSPGVLVRTGHTVLTWGITLVLFLHDTELRQWEEQGEL
LLPLTFLLLVLGSLLLYLAVSLMDPGYVNVQPQPQEELKEEQTAMVPPAIPLRRCRYC
LVLQPLRARHCRECRRCVRRYDHHCPWMENCVGERNHPLFVVYLALQLVVLLWGLYLA
WSGLRFFQPWGLWLRSSGLLFATFLLLSLFSLVASLLLVSHLYLVASNTTTWEFISSH
RIAYLRQRPSNPFDRGLTRNLAHFFCGWPSGSWETLWAEEEEEGSSPAV"
BASE COUNT 215 a 387 c 335 g 222 t
ORIGIN
1 ccgggccgag gcgatggcgc cctgggcgct cctcagccct ggggtcctgg tgcggaccgg
61 gcacaccgtg ctgacctggg gaatcacgct ggtgctcttc ctgcacgata ccgagctgcg
121 gcaatgggag gagcaggggg agctgctcct gcccctcacc ttcctgctcc tggtgctggg
181 ctccctgctg ctctacctcg ctgtgtcact catggaccct ggctacgtga atgtgcagcc
241 ccagcctcag gaggagctca aagaggagca gacagccatg gttcctccag ccatccctct
301 tcggcgctgc agatactgcc tggtgctgca gcccctgagg gctcggcact gccgtgagtg
361 ccgccgttgc gtccgccgct acgaccacca ctgcccctgg atggagaact gtgtgggaga
421 gcgcaaccac ccactctttg tggtctacct ggcgctgcag ctggtggtgc ttctgtgggg
481 cctgtacctg gcatggtcag gcctccggtt cttccagccc tggggtctgt ggttgcggtc
541 cagcgggctc ctgttcgcca ccttcctgct gctgtccctc ttctcgttgg tggccagcct
601 gctcctcgtc tcgcacctct acctggtggc cagcaacacc accacctggg aattcatctc
661 ctcacaccgc atcgcctatc tccgccagcg ccccagcaac cccttcgacc gaggcctgac
721 ccgcaacctg gcccacttct tctgtggatg gccctcaggg tcctgggaga ccctctgggc
781 tgaggaggag gaagagggca gcagcccagc tgtttagggt tgctggaggc cgggctaccg
841 tcttgtgcct gaaaaccacg gggcctgtcc ccagctgggg tgagcgctca gagggcctgg
901 ggccctcact cctgcccacg cctcccagac cccagaacgg agcttcaagt cagacagatc
961 cctgccttgg tgggcagttc tgccttccaa ggaagaaggg gaagaaaagg acctgtgggt
1021 ggctcaggcc caagcagacc ccgggctcca ccccagcccc gcccaggctg ctgccagtgc
1081 acacttttac aaatttaata taaagcaagt ccagtcttaa aaagacaaaa aaaaaaaaaa
1141 aaaaaaaaaa aaaaaaaaa
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