LOCUS BC009010 1126 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens chromosome 6 open reading frame 142, mRNA (cDNA clone MGC:18257 IMAGE:4158300), complete cds. ACCESSION BC009010 VERSION BC009010.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1126) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1126) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (30-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: g Column: 5. FEATURES Location/Qualifiers source 1..1126 /db_xref="H-InvDB:HIT000034137" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:18257 IMAGE:4158300" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1126 /gene="C6orf142" /gene_synonym="MGC18257" /db_xref="GeneID:90523" CDS 47..751 /gene="C6orf142" /gene_synonym="MGC18257" /codon_start=1 /product="C6orf142 protein" /protein_id="AAH09010.1" /db_xref="GeneID:90523" /translation="MCSWYLGFECSSKSNDYLTLNAGSQQERDQAKLTCPSEVSGTIL QEREFEANKLQGMQQSDLFKAEYVLIVDSEGEDEAASRKVEQGPPGGIGTAAIRPKSL AISSSLVSDVVRPKTQGTDLKTSSHPEMLHGMAPQQKHGQTPTTLPRAAGRETKYANL SSPTSTVSESQLTKPGVIRPVPVKSRILLKKEEEVYEPTPFSKYLEDNSDLFSEQLSH PMVAIPEHEALDSKEQ" BASE COUNT 373 a 247 c 234 g 272 t ORIGIN 1 actgctttct tgacatctgc tagtttgaca cgtggcaccg gattccatgt gcagctggta 61 ccttggattt gaatgttctt ctaaatccaa tgactacttg accttgaatg ctgggagcca 121 acaagagaga gaccaagcga aattgacttg tccttcagag gtcagtggaa cgattttaca 181 agaaagggaa ttcgaagcaa acaaacttca agggatgcag caaagtgacc tcttcaaagc 241 tgaatatgtc cttattgtgg actccgaagg ggaagatgag gctgcaagca gaaaagttga 301 acaaggcccc ccagggggga ttggcaccgc agctatccgg cccaagtctc tagctatctc 361 gtccagtctg gtctctgatg tagtgcgtcc caaaacacag gggactgatc tcaagacctc 421 atcacatcct gaaatgcttc atgggatggc ccctcagcaa aagcatgggc agactcctac 481 aactcttcca agagcagctg gtcgagaaac caaatatgca aatctctcct caccaacttc 541 tacagtatct gagagtcagc tgactaagcc tggagtaatt cgcccagtac ctgtaaaatc 601 cagaatatta ctgaaaaaag aggaggaagt ctatgaaccc acccctttca gtaaatactt 661 ggaagataac agcgacctct tttctgaaca gctgagtcat ccaatggtgg ctattcctga 721 acatgaagct cttgattcca aagagcaatg aagttggagc agaggctgaa aacacaggct 781 gctgaagttt tttggaatgc tggtgctaac cacttgctag atttaacttt tttttttttt 841 ccagaatgag tgctcccttt atgagctgca gtgcagcaga accaaaaaaa aagtttgctg 901 caattatata gcatcacagt gctctgctaa cagccagcat agaagagatt tacctacagc 961 tttttgcacc actgttctag cctttaatgc cttctactta atattaagct gaccgcaata 1021 ctaacgtgcc cctatatttg gcagccaaat aaagaagaat cgtgggtaaa tagaaaaaaa 1081 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa //