LOCUS BC008794 4607 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens POM121 membrane glycoprotein (rat), mRNA (cDNA clone
MGC:3792 IMAGE:3621228), complete cds.
ACCESSION BC008794
VERSION BC008794.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4607)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4607)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008794.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: n Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 26051277.
FEATURES Location/Qualifiers
source 1..4607
/db_xref="H-InvDB:HIT000033974"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3792 IMAGE:3621228"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4607
/gene="POM121"
/gene_synonym="DKFZP586G1822"
/gene_synonym="DKFZP586P2220"
/gene_synonym="KIAA0618"
/gene_synonym="MGC3792"
/db_xref="GeneID:9883"
/db_xref="HGNC:HGNC:19702"
CDS 301..3255
/gene="POM121"
/gene_synonym="DKFZP586G1822"
/gene_synonym="DKFZP586P2220"
/gene_synonym="KIAA0618"
/gene_synonym="MGC3792"
/codon_start=1
/product="POM121 membrane glycoprotein (rat)"
/protein_id="AAH08794.1"
/db_xref="GeneID:9883"
/db_xref="HGNC:HGNC:19702"
/translation="MVCSPVTVRIAPPDRRFSRSAIPEQIISSTLSSPSSNAPDPCAK
ETVLSALKEKEKKRTVEEEDQIFLDGQENKRRRHDSSGSGHSAFEPLVANGVPASFVP
KPGSLKRGLNSQSSDDHLNKRSRSSSMSSLTGAYASGIPSSSRNAITSSYSSTRGISQ
LWKRNGPSSSPFSSPASSRSQTPERPAKKIREEELCHHSSSSTPLAADRESQGEKAAD
TTPRKKQNSNSQSTPGSSGQRKRKVQLLPSRRGEQLTLPPPPQLGYSITAEDLDLEKK
ASLQWFNQALEDKSDAASNSVTETPPITQPSFTFTLPAAAPASPPTSLLAPSTNPLLE
SLKKMQTPPSLPPCPESAGAATTEALSPPKTPSLLPPLGLSQSGPPGLLPSPSFDSKP
PTTLLGLIPAPSMVPATDTKAPPTLQAETATKPQATSAPSPAPKQSFLFGTQNTSPSS
PAAPAASSAPPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQP
VFSSMGPPASVPLPAPFFKQTTTPATAPTTTAPLFTGLASATSAVAPITSASPSTDSA
SKPAFGFGINSVSSSSVSTTTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGKPPA
LPTTTTVTTFSQSLHTAVPTATSSSAADFSGFGSTLATSAPATSSQPTLTFSNTSTPT
FNIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAKPALAPSFGSSFTFGNSAAPAA
APTPAPPSMIKVVPAYVPTPIHPIFGGATHSAFGLKATASAFGAPASSQPAFGGSTAV
FFGAATSSGFGATTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGSGSFGINVATPGSS
TTTGAFSFGAGQSGSTATSTPFAGGLGQNALGTTGQSTPFAFNVSSTTESKPVFGGTA
TPTFGLNTPAPGVGTSGSSLSFGASSAPAQGFVGVAPFGSAALSFSIGAGSKTPGARQ
RLQARRQHTRKK"
BASE COUNT 979 a 1544 c 1100 g 984 t
ORIGIN
1 gagatctgaa gccgagcaac ttgcccaagt ccttcttctt ttcccattaa caagatatga
61 tatcaccaag ccaaacgtca tcattaagtt ggagcaggga gaggagctgt ggataacggg
121 aggtgaattt ccatgtcaac atagtccagg gattgtggga ctttaccaaa tcggtttgta
181 ataacaccta gaagacgcta tccgatccat caggcccagt attcctgtct gggggtactt
241 cccaccgtgt gctggaatgg ttatcacaag aaggctgtgc tgtcccctcg caactccagg
301 atggtgtgta gcccagtgac tgtgaggatc gcccctcctg acagaagatt ttcgcgttct
361 gcgataccag agcagataat cagctcaaca ctgtcctcac catcaagtaa cgccccagac
421 ccatgtgcaa aggagacagt actgagtgcc ctcaaagaga aggagaagaa aaggacagtg
481 gaggaagaag accaaatatt ccttgatggc caggaaaata aaagaaggcg ccatgatagc
541 agtggcagtg gacattcagc atttgagccc ctggtggcca atggagtccc cgcttctttt
601 gtgcctaagc ctgggtctct caagagaggc ctcaattctc agagctcaga tgaccacttg
661 aataagagat cccgaagctc ttccatgagc tccttgacag gcgcttacgc aagtggcatc
721 cctagctcca gccgcaatgc cattaccagt tcctacagct ccactcgagg catctcacag
781 ctctggaaga gaaatggccc cagttcatca cccttctcta gcccagcctc ctcccgctcc
841 cagacaccgg agaggccagc aaagaaaata agagaagagg agctgtgtca tcattccagt
901 tcttcaactc cattggcagc agacagggag tcccagggag aaaaggctgc agatacaacc
961 ccaaggaaga aacaaaactc gaattctcag tctacacctg gcagctctgg gcagcgtaag
1021 cggaaagttc agctgctgcc ttctcggcga ggggaacagc tgaccttgcc tccacctccc
1081 cagcttggct attcgatcac tgccgaggac ctagacttag agaagaaggc ttcattacag
1141 tggttcaacc aggccttgga ggacaagagc gatgctgcct cgaactctgt cactgagacc
1201 ccacctatca ctcagccttc atttaccttt accctgcctg ctgctgcacc tgcctcccca
1261 cccacctccc tcctggcccc aagcaccaac ccactgttag agagcttgaa gaagatgcag
1321 actcccccga gcctgccacc ctgcccagaa tctgctggag cagcaaccac tgaggccctc
1381 tcacctccaa agacacccag cctcctaccc ccgctgggtt tatcacagtc agggccgcca
1441 gggctgctcc ccagcccctc ctttgactcc aaacccccga ccactttgct ggggctgatc
1501 cctgctccat ccatggtacc agccactgac accaaggcac ctccaaccct tcaggcagag
1561 acggctacca aaccccaagc cacatctgcc ccgtcccccg cccccaagca aagcttcctg
1621 tttggaacac agaacacctc accttccagc cctgccgccc ctgctgcatc ttcagcacct
1681 cccatgttca agcccatttt cacggctcca cccaagagtg agaaggaagg ccccacaccg
1741 cctggccctt cagtcacagc cacagcgccc tccagctcct ccctccccac gaccaccagc
1801 accacagccc cgaccttcca gcctgtcttt agcagcatgg ggccacctgc atctgtgccc
1861 ttgcctgctc ccttcttcaa gcagacaact actcccgcca ctgctcccac cacaactgcc
1921 ccgctcttca ctggcctggc cagcgccacc tctgctgtgg ctcccatcac ctctgccagt
1981 ccatccacag actctgcttc gaagcctgcg tttggctttg gcataaacag tgtgagcagc
2041 agcagtgtga gtaccacgac cagcaccgcc actgccgcct cacagccttt cctcttcggg
2101 gcgccccagg cctctgctgc cagcttcacc ccggccatgg gctccatatt ccagtttggc
2161 aaacctcctg ccttgcccac aaccaccaca gtcaccacct tcagccagtc cctgcacact
2221 gccgtgccaa cggccaccag cagcagcgct gccgacttta gtggttttgg cagcaccctc
2281 gccacctccg ccccggccac cagcagccag cccactctga cgttcagtaa cacgagcacc
2341 cccacgttca acattccctt tggctcaagc gccaagtccc cgctcccatc atatccggga
2401 gccaaccccc agcccgcatt tggggccgct gaggggcagc caccgggggc cgccaagccg
2461 gcccttgccc ccagctttgg cagctctttc acttttggaa actctgcagc cccggctgct
2521 gcacccacac ctgcacctcc gtccatgatc aaggtcgtgc ctgcgtacgt gcctacgccc
2581 atccatccta tctttggcgg tgccacgcac tcggcgtttg ggttgaaagc cacggcttcg
2641 gccttcggcg ctcccgccag ctcacagccc gcctttggcg gctccactgc tgtcttcttc
2701 ggtgcagcca ccagctccgg ctttggagcc accacccaga ccgccagcag cgggagcagc
2761 agctcggtgt ttggcagcac aacaccatca cccttcacgt ttgggggttc ggcagccccc
2821 gctggcagtg ggagctttgg gatcaatgtg gccaccccag gctccagcac caccaccgga
2881 gctttcagct ttggagcagg acagagtggg agcacagcca cctccacccc cttcgcaggg
2941 ggcttaggtc agaacgccct gggcaccacc ggccagagca caccgtttgc cttcaacgtg
3001 agcagcacaa ctgagagcaa acctgtgttt ggaggcaccg ccacccccac ctttggtctg
3061 aacacccctg cgcctggagt gggcacatca ggcagcagcc tctcctttgg ggcatcctca
3121 gcacccgccc aaggctttgt tggtgttgca cctttcggat cggcggccct ttcattttcc
3181 attggtgcgg gatccaagac cccaggggct cgacagcgac tgcaggcccg aaggcagcac
3241 acccgcaaaa agtagccttt gtcccctgtc cctgttcccc ccaccccttc cctaaatctg
3301 gaccttggca cctgctagga agagccttgg acccttccag ttgcgtaaag caaacctacc
3361 ccggatctct ggcttcagcc gccagggggc agtggcagcc ctggggccct ttcccttctg
3421 gaggaagcac aagcctcagg gaaggggaag caggatgcgg agggccaaag cccgggacct
3481 ctacttgaac agttctactg gggaggctgg agaactaagg aaacacctgt acatagtgtc
3541 cgctgccctg actcccgctt agcacaccct taggcaggcg ccccttccac ctttccccga
3601 gaccgtcgtc gctggagggg gcagggtcca gcccgcctgg atcggtggtg tgcacctgat
3661 gggatttggg aaatgggcta tccgtaaagc tttatcttgc ttggcttagc tgtgagaagt
3721 ggttctcttc ctctggtccc ttctggggac tctgtttccc catttcttgc tgctgtgtcc
3781 ctcaccagtt ccttgcagga ttccttcgtt tttaaatgcc cttgaatcta gctttgcctt
3841 ggagacccca gtgggtgctg ctcctgccgt tttcttcctg ccaagcctga atcaatgttt
3901 catctccaac cctctgccag tttggcccct cagagcttgg tggctcaaga ctgttagcct
3961 ggcagagcca ggggtgaagg gagaagctct tggagcaggc aggatgccca ccgctgcttc
4021 agctgcctcc tcgcccagct accctttggc cccattgggc cctcgtctgc ctctccagga
4081 ttgtatgttt caagccttgt cctgtgttcc tttgtctgat gctctgtgta ttgctctttg
4141 aatcgagttt ggaggaagag ttgagttgta tgagtggcgg catgttggta gtgccggact
4201 tcctgtttca agttttctgg ggcctcgcta attgaatgtg gaaagtagca ccacttgacg
4261 gctacaagtg ccgactcctg aattttccca tggtgttctg acttcaaggg ctggcagcca
4321 gggagaatgg gcccagggga agcaaagacc tcttccctct gccgtttctg tcccacttaa
4381 ctgacctcac tggaggctac atcacccaaa gtagatgtta gaaaacctaa attaatgaac
4441 catattttta aaatcctatt tttcccaaac agggccctct gcagcccatc ctttccttcc
4501 gtccttctga aaccacatac cccaggccca agcgccttgc tgccacgccc aacctctttg
4561 ggagaagtat gaatgcgtgt gtctaaatta aaaaaaaaaa aaaaaaa
//