LOCUS BC008203 1428 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens transmembrane protein 187, mRNA (cDNA clone MGC:17711 IMAGE:3868838), complete cds. ACCESSION BC008203 VERSION BC008203.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1428) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1428) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: i Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4504738. FEATURES Location/Qualifiers source 1..1428 /db_xref="H-InvDB:HIT000033674" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17711 IMAGE:3868838" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1428 /gene="TMEM187" /gene_synonym="DXS9878E" /gene_synonym="ITBA1" /db_xref="GeneID:8269" /db_xref="HGNC:HGNC:13705" /db_xref="MIM:300059" CDS 283..1068 /gene="TMEM187" /gene_synonym="DXS9878E" /gene_synonym="ITBA1" /codon_start=1 /product="transmembrane protein 187" /protein_id="AAH08203.1" /db_xref="GeneID:8269" /db_xref="HGNC:HGNC:13705" /db_xref="MIM:300059" /translation="MNPEWGQAFVHVAVAGGLCAVAVFTGIFDSVSVQVGYEHYAEAP VAGLPAFLAMPFNSLVNMAYTLLGLSWLHRGGAMGLGPRYLKDVFAAMALLYGPVQWL RLWTQWRRAAVLDQWLTLPIFAWPVAWCLYLDRGWRPWLFLSLECVSLASYGLALLHP QGFEVALGAHVVAAVGQALRTHRHYGSTTSATYLALGVLSCLGFVVLKLCDHQLARWR LFQCLTGHFWSKVCDVLQFHFAFLFLTHFNTHPRFHPSGGKTR" BASE COUNT 261 a 415 c 422 g 330 t ORIGIN 1 atttccccca gcgaggcgag tgaggcgaaa tacccgtatg gtgatagctg gccttttcgc 61 gccaatactg aaaaaggcag aacgttcctc cgctggcgcc agccaatcag caggactcct 121 gccttccttc ggggcaaggt cgcagcatct gcctcggaaa tcacgaaatc acggggcttc 181 tttctgctgg ctcagccggg aggcccagag tgttctgcag aggctgcgta ttgaaggctg 241 ctctctgaag ctccctgccc caggtcacgc cgccggttcc agatgaatcc agagtggggg 301 caggccttcg tgcacgtggc cgtggccggt ggcctctgtg ccgtggctgt gttcacgggc 361 attttcgaca gtgtttccgt gcaagtgggc tatgagcact acgccgaggc gcccgtggcc 421 ggcctccctg ccttcctggc catgccgttc aactcactcg tgaacatggc ctacacgctg 481 ctggggctgt cgtggctgca caggggcggc gcgatggggc tgggtccccg ctacctgaag 541 gacgtgttcg cagccatggc cctgctctat ggccccgtgc agtggctgcg cctgtggacg 601 cagtggcgcc gtgccgcggt gctggaccag tggctcacac tgcccatctt tgcatggccc 661 gtggcctggt gcctctacct agaccgcggc tggcggccct ggctgttcct ctctcttgag 721 tgcgtctccc tggccagtta tggcctcgct ctgctgcatc cccagggctt cgaggtcgca 781 ctgggtgctc acgtggtggc cgctgtgggg caggcgctgc gcacccacag gcactatggc 841 agcaccacct cggctaccta cttagctttg ggggtgctct cttgcctggg ctttgtggtc 901 ctcaagctgt gtgaccatca gctcgcacgg tggcgtctct tccagtgcct cacaggccac 961 ttctggtcca aggtctgtga cgtgctccag ttccactttg cgtttttgtt tctgacgcat 1021 ttcaacactc acccaagatt ccatccctct ggcgggaaga cgcgttgaac ccagggaaga 1081 acctgctgaa aaccgatgac ccccagcatt gaaatggact ctgagatggc agcgtggtgc 1141 cagtgtcaga catcctgtgt gtgatgatat gcactgatca cacaagactg ccctttcctg 1201 agaagctgcg ggcttcggtg tggaggggtg gagtgctgtg atctcgacaa cttactttca 1261 aagacataaa gcacagatct ccgcacaggg gatgtgtgtg ttcctgatgt aatttgcata 1321 acttttctgt agtttgaaat gtttccaaat aaatattggc aaggggagtg gaaatgacac 1381 caagaagccc ctcatgctca tggttggaca gagaaaaaaa aaaaaaaa //