LOCUS BC008071 3301 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 21, mRNA (cDNA clone MGC:2857 IMAGE:2987980), complete cds. ACCESSION BC008071 VERSION BC008071.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3301) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3301) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC008071.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 3 Row: d Column: 3. FEATURES Location/Qualifiers source 1..3301 /db_xref="H-InvDB:HIT000033629" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2857 IMAGE:2987980" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_15" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3301 /gene="DDX21" /gene_synonym="GUA" /gene_synonym="GURDB" /gene_synonym="RH-II/GU" /gene_synonym="RH-II/GuA" /db_xref="GeneID:9188" /db_xref="HGNC:HGNC:2744" /db_xref="MIM:606357" CDS 42..2393 /gene="DDX21" /gene_synonym="GUA" /gene_synonym="GURDB" /gene_synonym="RH-II/GU" /gene_synonym="RH-II/GuA" /codon_start=1 /product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 21" /protein_id="AAH08071.2" /db_xref="GeneID:9188" /db_xref="HGNC:HGNC:2744" /db_xref="MIM:606357" /translation="MPGKLRSDAGLESDTAMKKGETLRKQTEEKEKKEKPKSDKTEEI AEEEETVFPKAKQVKKKAEPSEVDMNSPKSKKAKKKEEPSQNDISPKTKSLRKKKEPI EKKVVSSKTKKVTKNEEPSEEEIDAPKPKKMKKEKEMNGETREKSPKLKNGFPHPEPD CNPSEAASEESNSEIEQEIPVEQKEGAFSNFPISEETIKLLKGRGVTFLFPIQAKTFH HVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRELANQV SKDFSDITKKLSVACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHIQNGKLDLTKLK HVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKS TYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGRTIIFCETKKE AQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDL VIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVP SATEIIKASSKDAIRLLDSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISGATSV DQRSLINSNVGFVTMILQCSIEMPNISYAWKELKEQLGEEIDSKVKGMVFLKGKLGVC FDVPTASVTEIQEKWHDSRRWQLSVATEQPELEGPREGYGGFRGQREGSRGFRGQRDG NRRFRGQREGSRGPRGQRSGGGNKSNRSQNKGQKRSFSKAFGQ" BASE COUNT 1096 a 603 c 774 g 828 t ORIGIN 1 cggttgagaa gaccggtcgg cctgggcaac ctgcgctgaa gatgccggga aaactccgta 61 gtgacgctgg tttggaatca gacaccgcaa tgaaaaaagg ggagacactg cgaaagcaaa 121 ccgaggagaa agagaaaaaa gagaagccaa aatctgataa gactgaagag atagcagaag 181 aggaagaaac tgttttcccc aaagctaaac aagttaaaaa gaaagcagag ccttctgaag 241 ttgacatgaa ttctcctaaa tccaaaaagg caaaaaagaa agaggagcca tctcaaaatg 301 acatttctcc taaaaccaaa agtttgagaa agaaaaagga gcccattgaa aagaaagtgg 361 tttcttctaa aaccaaaaaa gtgacaaaaa atgaggagcc ttctgaggaa gaaatagatg 421 ctcctaagcc caagaagatg aagaaagaaa aggaaatgaa tggagaaact agagagaaaa 481 gccccaaact gaagaatgga tttcctcatc ctgaaccgga ctgtaacccc agtgaagctg 541 ccagtgaaga aagtaacagt gagatagagc aggaaatacc tgtggaacaa aaagaaggcg 601 ctttctctaa ttttcccata tctgaagaaa ctattaaact tctcaaaggc cgaggagtga 661 ccttcctatt tcctatacaa gcaaagacat tccatcatgt ttacagcggg aaggacttaa 721 ttgcacaggc acggacagga actgggaaga cattctcctt tgccatccct ttgattgaga 781 aacttcatgg ggaactgcaa gacaggaaga gaggccgtgc ccctcaggta ctggttcttg 841 cacctacaag agagttggca aatcaagtaa gcaaagactt cagtgacatc acaaaaaagc 901 tgtcagtggc ttgtttttat ggtggaactc cctatggagg tcaatttgaa cgcatgagga 961 atgggattga tatcctggtt ggaacaccag gtcgtatcaa agaccacata cagaatggca 1021 aactagatct caccaaactt aagcatgttg tcctggatga agtggaccag atgttggata 1081 tgggatttgc tgatcaagtg gaagagattt taagtgtggc atacaagaaa gattctgaag 1141 acaatcccca aacattgctt ttttctgcaa cttgccctca ttgggtattt aatgttgcca 1201 agaaatacat gaaatctaca tatgaacagg tggacctgat tggtaaaaag actcagaaaa 1261 cggcaataac tgtggagcat ctggctatta agtgccactg gactcagagg gcagcagtta 1321 ttggggatgt catccgagta tatagtggtc atcaaggacg cactatcatc ttttgtgaaa 1381 ccaagaaaga agcccaggag ctgtcccaga attcagctat aaagcaggat gctcagtcct 1441 tgcatggaga cattccacag aagcaaaggg aaatcaccct gaaaggtttt agaaatggta 1501 gttttggagt tttggtggca accaatgttg ctgcacgtgg gttagacatc cctgaggttg 1561 atttggttat acaaagctct ccaccaaagg atgtagagtc ctacattcat cgatccgggc 1621 ggacaggcag agctggaagg acgggggtgt gcatctgctt ttatcagcac aaggaagaat 1681 atcagttagt acaagtggag caaaaagcgg gaattaagtt caaacgaata ggtgttcctt 1741 ctgcaacaga aataataaaa gcttccagca aagatgccat caggcttttg gattccgtgc 1801 ctcccactgc cattagtcac ttcaaacaat cagctgagaa gctgatagag gagaagggag 1861 ctgtggaagc tctggcagca gcactggccc atatttcagg tgccacgtcc gtagaccagc 1921 gctccttgat caactcaaat gtgggttttg tgaccatgat cttgcagtgc tcaattgaaa 1981 tgccaaatat tagttatgct tggaaagaac ttaaagagca gctgggcgag gagattgatt 2041 ccaaagtgaa gggaatggtt tttctcaaag gaaagctggg tgtttgcttt gatgtaccta 2101 ccgcatcagt aacagaaata caggagaaat ggcatgattc acgacgctgg cagctctctg 2161 tggccacaga gcaaccagaa ctggaaggac cacgggaagg atatggaggc ttcaggggac 2221 agcgggaagg cagtcgaggc ttcaggggac agcgggacgg aaacagaaga ttcagaggac 2281 agcgggaagg cagtagaggc ccgagaggac agcgatcagg aggtggcaac aaaagtaaca 2341 gatcccaaaa caaaggccag aagcggagtt tcagtaaagc atttggtcaa taattagaaa 2401 tagaagattt atatagcaaa aagagaatga tgtttggcaa tatagaactg aacattattt 2461 ttcatgcaaa gttaaaagca cattgtgcct ccttttgacc acttgccaag tccctgtctc 2521 tttcagacac agacaagctt catttaaatt atttcatctg atcattatca tttataactt 2581 tattgttact tcatcagttt ttccttttga aaggtgtatg aattcattac atttttattc 2641 taatgtatta tctgtagatt agaagataaa atcaagcatg tatctgccta tactttgtga 2701 gttcacctgt ctttatactc aaaagtgtcc cttaatagtg tccttccctg aaataaatac 2761 ctaagggagt gtaacagtct ctggaggacc actttgagcc tttggaagtt aaggtttcct 2821 cagccacctg ccgaacagtt tctcatgtgg tcctattatt tgtctactga gacttaatac 2881 tgagcaatgt tttgaaacaa gatttcaaac taatctgggt tgtaatacag tttataccag 2941 tgtatgctct agacttggaa gatgtagtat gtttgatgtg gattacctat acttatgttc 3001 gttttgatac atttttagct tctcattata aggtgattca tgctttagtg aattcttcat 3061 agatagtata tataaaagta cattttaata gaaagccagg gttttaagga atttcacatg 3121 tataaggtgg ctccatagct ttatttgtaa gtaggctgga taaatggtgc ttaaatggta 3181 atgtactcca cttcttccta ttggaagatt aacattattt accaagaagg acttaaggga 3241 gtaaggggcg cagattagca ttgctcaaga gtatgtaaaa aaaaaaaaaa aaaaaaaaaa 3301 a //