LOCUS BC008045 1411 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SERPINE1 mRNA binding protein 1, mRNA (cDNA clone
MGC:16069 IMAGE:3615828), complete cds.
ACCESSION BC008045
VERSION BC008045.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1411)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1411)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008045.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1411
/db_xref="H-InvDB:HIT000033612"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16069 IMAGE:3615828"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1411
/gene="SERBP1"
/gene_synonym="CGI-55"
/gene_synonym="CHD3IP"
/gene_synonym="DKFZp564M2423"
/gene_synonym="HABP4L"
/gene_synonym="PAI-RBP1"
/gene_synonym="PAIRBP1"
/db_xref="GeneID:26135"
/db_xref="HGNC:HGNC:17860"
/db_xref="MIM:607378"
CDS 72..1298
/gene="SERBP1"
/gene_synonym="CGI-55"
/gene_synonym="CHD3IP"
/gene_synonym="DKFZp564M2423"
/gene_synonym="HABP4L"
/gene_synonym="PAI-RBP1"
/gene_synonym="PAIRBP1"
/codon_start=1
/product="SERPINE1 mRNA binding protein 1"
/protein_id="AAH08045.1"
/db_xref="GeneID:26135"
/db_xref="HGNC:HGNC:17860"
/db_xref="MIM:607378"
/translation="MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGG
GVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALK
KEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDR
PIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSSFSHYSGLKHEDKRGG
SGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKENE
VEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAH
AEDSVMDHHFRKPANDITSQLEINFGDLGRPGRGGRGGRGGRGRGGRPNRGSRTDKSS
ASAPDVDDPEAFPALA"
BASE COUNT 436 a 298 c 414 g 263 t
ORIGIN
1 ctgaagcagg cgctcttggc tcggcgcggc ccgctgcaat ccgtggagga acgcgccgcc
61 gagccaccat catgcctggg cacttacagg aaggcttcgg ctgcgtggtc accaaccgat
121 tcgaccagtt atttgacgac gaatcggacc ccttcgaggt gctgaaggca gcagagaaca
181 agaaaaaaga agccggcggg ggcggcgttg ggggccctgg ggccaagagc gcagctcagg
241 ccgcggccca gaccaactcc aacgcggcag gcaaacagct gcgcaaggag tcccagaaag
301 accgcaagaa cccgctgccc cccagcgttg gcgtggttga caagaaagag gagacgcagc
361 cgcccgtggc gcttaagaaa gaaggaataa gacgagttgg aagaagacct gatcaacaac
421 ttcagggtga agggaaaata attgatagaa gaccagaaag gcgaccacct cgtgaacgaa
481 gattcgaaaa gccacttgaa gaaaagggtg aaggaggcga attttcagtt gatagaccga
541 ttattgaccg acctattcga ggtcgtggtg gtcttggaag aggtcgaggg ggccgtggac
601 gtggaatggg ccgaggagat ggatttgatt ctcgtggcaa acgtgaattt gataggcata
661 gtggaagtga tagatcttct ttttcacatt acagtggcct gaagcacgag gacaaacgtg
721 gaggtagcgg atctcacaac tggggaactg tcaaagacga attaacagag tcccccaaat
781 acattcagaa acaaatatct tataattaca gtgacttgga tcaatcaaat gtgactgagg
841 aaacacctga aggtgaagaa catcatccag tggcagacac tgaaaataag gagaatgaag
901 ttgaagaggt aaaagaggag ggtccaaaag agatgacttt ggatgagtgg aaggctattc
961 aaaataagga ccgggcaaaa gtagaattta atatccgaaa accaaatgaa ggtgctgatg
1021 ggcagtggaa gaagggattt gttcttcata aatcaaagag tgaagaggct catgctgaag
1081 attcggttat ggaccatcat ttccggaagc cagcaaatga tataacgtct cagctggaga
1141 tcaattttgg agaccttggc cgcccaggac gtggcggcag gggaggacga ggtggacgtg
1201 ggcgtggtgg gcgcccaaac cgtggcagca ggaccgacaa gtcaagtgct tctgctcctg
1261 atgtggatga cccagaggca ttcccagctc tggcttaact ggatgccata agacaaccct
1321 ggttcctttg tgaacccttc tgttcaaagc ttttgcatgc ttaaggattc caaacgacta
1381 agaaattaaa aaaaaaaaaa aaaaaaaaaa a
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