LOCUS BC007943 2347 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens calsyntenin 2, mRNA (cDNA clone IMAGE:4130487),
partial cds.
ACCESSION BC007943
VERSION BC007943.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2347)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2347)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007943.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: h Column: 18.
FEATURES Location/Qualifiers
source 1..2347
/db_xref="H-InvDB:HIT000086961"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4130487"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2347
/gene="CLSTN2"
/gene_synonym="alcagamma"
/gene_synonym="CS2"
/gene_synonym="CSTN2"
/db_xref="GeneID:64084"
CDS <1..505
/gene="CLSTN2"
/gene_synonym="alcagamma"
/gene_synonym="CS2"
/gene_synonym="CSTN2"
/codon_start=2
/product="CLSTN2 protein"
/protein_id="AAH07943.2"
/db_xref="GeneID:64084"
/translation="ILHEDQVSDKEHVNHLIVQPPFLQSVHHPESRSSIQHSSVVPSI
ATVVIIISVCMLVFVVAMGVYRVRIAHQHFIQETEAAKESEMDWDDSALTITVNPMEK
HEGPGHGEDETEGEEEEEAEEEMSSSSGSDDSEEEEEEEGMGRGRHGQNGARQAQLEW
DDSTLPY"
BASE COUNT 613 a 614 c 540 g 580 t
ORIGIN
1 catccttcat gaagaccaag tctcagataa ggagcatgtc aatcatctga ttgtgcagcc
61 tcccttcctc cagtctgtcc atcatcctga gtcccggagt agcatccagc acagttcagt
121 ggtcccaagc attgccacag tggtcatcat catctccgtg tgcatgcttg tgtttgttgt
181 ggccatgggt gtgtaccggg tccggatcgc ccaccagcac ttcatccagg agactgaggc
241 tgccaaggaa tctgagatgg actgggacga ttctgcgctg actatcacag tcaaccccat
301 ggagaaacat gaaggaccag ggcatgggga agatgagact gagggagaag aggaggaaga
361 agccgaggaa gaaatgagct ccagcagtgg ctctgacgac agcgaagagg aggaggagga
421 ggaagggatg ggcagaggca gacatgggca gaatggagcc aggcaagccc agctggagtg
481 ggatgactcc accctcccct actagtgccc aggggtctgc tgcccggccc acatgtccct
541 tttgtaaacc ctgacccagt gtatgcccat gtctatcata cctcacctct gatgtctgtg
601 acatgtctgg gaaggccttc tccagcttcc tggagcccac cctttaagcc ttgggcactc
661 cctgtgtttc atccatgggg aagttccaag aagcccagca tggccatcag tgaggacttc
721 agggtagact ttgtcctgta gcccccactt ctgccctaag ttccccagca tcctgactac
781 ctgtctgcag agtttgcctt tgttttttcc tgcagggaag aaggcccacc tttgtgtcac
841 tcacctcccc aggctcagag tccccaaggc cctggggttc caactcactg tgcgtctcct
901 ccacacagac cagcaggttc tcctatgctg actccaggtt gcttcataca aggagggtgg
961 ttgaacttca cacacgtaag gtcttagtgc ttaacagttt aaaggaaagt ccttgttgag
1021 gcagaactaa gtttacaggg aaaggtacac acattctctc tctctctctc tctctctctg
1081 tctatctagt tccccagctt ggagagcctt tccccttgct tctttctgag gccatataag
1141 cttataagaa aagtcccaaa ccaagaatag gtccttggcc acaagcaggg tctgatcccc
1201 catcagagct atctgagcct gcctgtctgg gcacctgctg caaccatgca gctaccctgc
1261 caggggcact cagcaaacag aaccacaggg cccaggaggc attccacaca ggcactgccc
1321 caggacaaca caacaaggac agtcacaaca aggacaacaa ggacacaaca caacacacaa
1381 caaggacagt cacaacaagc ctagagccag aaagcagatg gaaatgctaa tgaggtcaaa
1441 cgtaggcttc atggtgggtg gagtgggggt ggctgggctc ccccaggaca gaggggaccc
1501 tgaggttggc aaggctctca ccactcagcc ttatggtccc ttatctccta tcttccctct
1561 tgagaaaata cacgctttct gcatgtatta gaaacgcacg agctccacca agtctacaat
1621 gaaagtttga aatttaactg caaggaatta gaagcatatt tgcaatcatt gcagcttctt
1681 ctttcttctg ctcataaaag gaggaacact ttagatagag ggcaaatata tctgaaaacc
1741 taatttcttt ctttttttga taaggaaatc ttttccatct ccatcctaac atgcacaacc
1801 tgtgaagaga attgtttcta tagtaactgg tctgtgatct tttgtggcca agagaatagc
1861 aggcaagaat tagggccttg acagaatttc cacgaagctc tgagaacatg tttgtttcga
1921 atgtctgatt cctctttgtc atcaatgtgt atgctctgtc cccatccttc actcctcctc
1981 aagctcacac caattggttt ggcacaggca cagagctggt ccctagttaa gtggcattta
2041 tgttaaaaaa aaatagttca gaatctcagc cttttctttg tgtcatcaaa acagcttaag
2101 aaggggacta ctgccaatgt cctctagtct gacctccacc cagggaggac ccatggcagg
2161 tcttttcaac tttctgattc atgagaacaa ccttgtgaag cttttcccac ctcctaaagt
2221 gttttctgca tctgttcctt cctttggacc tcacaacaaa tcctgtgaag taactgagac
2281 atctgttgtt agatacattt ttgtgatgag taaactgagg cttcgtgaaa aaaaaaaaaa
2341 aaaaaaa
//