LOCUS BC007914 1846 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens protein kinase C and casein kinase substrate in
neurons 3, mRNA (cDNA clone MGC:14417 IMAGE:4302014), complete cds.
ACCESSION BC007914
VERSION BC007914.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1846)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1846)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007914.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: n Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147484.
FEATURES Location/Qualifiers
source 1..1846
/db_xref="H-InvDB:HIT000033530"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14417 IMAGE:4302014"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1846
/gene="PACSIN3"
/gene_synonym="SDPIII"
/db_xref="GeneID:29763"
/db_xref="HGNC:HGNC:8572"
/db_xref="MIM:606513"
CDS 144..1418
/gene="PACSIN3"
/gene_synonym="SDPIII"
/codon_start=1
/product="protein kinase C and casein kinase substrate in
neurons 3"
/protein_id="AAH07914.1"
/db_xref="GeneID:29763"
/db_xref="HGNC:HGNC:8572"
/db_xref="MIM:606513"
/translation="MAPEEDAGGEALGGSFWEAGNYRRTVQRVEDGHRLCGDLVSCFQ
ERARIEKAYAQQLADWARKWRGTVEKGPQYGTLEKAWHAFFTAAERLSALHLEVREKL
QGQDSERVRAWQRGAFHRPVLGGFRESRAAEDGFRKAQKPWLKRLKEVEASKKSYHAA
RKDEKTAQTRESHAKADSAVSQEQLRKLQERVERCAKEAEKTKAQYEQTLAELHRYTP
RYMEDMEQAFETCQAAERQRLLFFKDMLLTLHQHLDLSSSEKFHELHRDLHQGIEAAS
DEEDLRWWRSTHGPGMAMNWPQFEEWSLDTQRTISRKEKGGRSPDEVTLTSIVPTRDG
TAPPPQSPGSPGTGQDEEWSDEESPRKAATGVRVRALYDYAGQEADELSFRAGEELLK
MSEEDEQGWCQGQLQSGRIGLYPANYVECVGA"
BASE COUNT 406 a 508 c 641 g 291 t
ORIGIN
1 ggccggaccc ccacccgccg aggggcccag ggaggacgcg gcagagtcac ggtggcagca
61 ttgagagttg gacacccggg tccttgaagt gatctctagg ccccagcccc aaatccgcca
121 ccattccgtg ctgcggggac accatggctc cagaagagga cgctggaggg gaggccttag
181 ggggcagttt ctgggaggct ggcaactaca ggcgcacggt acagcgggtg gaggacgggc
241 accggctgtg cggggacctg gtcagctgct tccaggagcg cgcccgcatc gagaaggctt
301 atgcccagca gttggctgac tgggcccgaa agtggagggg gaccgtggag aagggccccc
361 agtatggcac actggagaag gcctggcatg cctttttcac ggcggctgag cggctgagcg
421 cgctgcacct ggaggtgcgg gagaagctgc aagggcagga cagtgagcgg gtgcgcgcct
481 ggcagcgggg ggctttccac cggcctgtgc tgggcggctt ccgcgagagc cgggcggccg
541 aggacggctt ccgcaaggcc cagaagccct ggctgaagag gctgaaggag gttgaggctt
601 ccaagaaaag ctaccacgca gcccggaagg atgagaagac cgcccagacg agggagagcc
661 acgcaaaggc agacagcgcc gtctcccagg agcagctgcg caaactgcag gaacgggtgg
721 aacgctgtgc caaggaggcc gagaagacaa aagctcagta tgagcagacg ctggcagagc
781 tgcatcgcta cactccacgc tacatggagg acatggaaca ggcctttgag acctgccagg
841 ccgccgagcg ccagcggctt cttttcttca aggatatgct gctcacctta caccagcacc
901 tggacctttc cagcagtgag aagttccatg aactccaccg tgacttgcac cagggcattg
961 aggcagccag tgacgaagag gatctgcgct ggtggcgcag cacccacggg ccaggcatgg
1021 ccatgaactg gccacagttc gaggagtggt ccttggacac acagaggaca atcagccgga
1081 aagagaaggg tggccggagc cctgatgagg ttaccctgac cagcattgtg cctacaagag
1141 atggcaccgc acccccaccc cagtccccgg ggtccccagg cacggggcag gatgaggagt
1201 ggtcagatga agagagtccc cggaaggctg ccaccggggt tcgggtgagg gcactctatg
1261 actacgctgg ccaggaagct gatgagctga gcttccgagc aggggaggag ctgctgaaga
1321 tgagtgagga ggacgagcag ggctggtgcc aaggccagtt gcagagtggc cgcattggcc
1381 tgtaccctgc caactacgtg gagtgtgtgg gcgcctgagt gtcctgacag cccttctgca
1441 acgtttaccc accctggttc agagcccagc ttctcctgga gagccggacc ctcagggccc
1501 tgaaccgtcg ctctctggct gctcctctgt cccttgaggg aggaagtcct gggacccagg
1561 gaggggaggg gcctttgtct agggaaggga ctggtaggga agggacgagt ctaggctgag
1621 ggcaagatgg gaggtcagag gtgacagaag cgttcagggg tgcctgggcc tccccaggag
1681 ctgtggactc agttcctgac ctctgctttg gggttcctgg ggtgggcttg gggtgagtgt
1741 agttctggcc tagcagcacc ctcttgtggc ttgttctagc gtgtattaaa acttgacaca
1801 cacccacaca caaaaacaaa aacaccaaaa aaaaaaaaaa aaaaaa
//