LOCUS BC007897 2957 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 2, mRNA (cDNA clone MGC:14274 IMAGE:4131391), complete
cds.
ACCESSION BC007897
VERSION BC007897.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2957)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2957)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007897.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: h Column: 9.
FEATURES Location/Qualifiers
source 1..2957
/db_xref="H-InvDB:HIT000033520"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14274 IMAGE:4131391"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2957
/gene="PSMD2"
/gene_synonym="MGC14274"
/gene_synonym="P97"
/gene_synonym="S2"
/gene_synonym="TRAP2"
/db_xref="GeneID:5708"
/db_xref="HGNC:HGNC:9559"
/db_xref="MIM:606223"
CDS 1..2727
/gene="PSMD2"
/gene_synonym="MGC14274"
/gene_synonym="P97"
/gene_synonym="S2"
/gene_synonym="TRAP2"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
non-ATPase, 2"
/protein_id="AAH07897.1"
/db_xref="GeneID:5708"
/db_xref="HGNC:HGNC:9559"
/db_xref="MIM:606223"
/translation="MEEGGRDKAPVQPQQSPAAAPGGTDEKPSGKERRDAGDKDKEQE
LSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPH
YGKLKEIYENMAPGENKRFAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVR
HLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLE
KDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDME
LVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALA
RELDIMEPKVPDDIYKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT
DDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGI
VNSGVRNECDPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDS
KSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNH
LGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE
KEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYG
EPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYYSIFAMGMVGSGTNNAR
LAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLT
VLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQA
GKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKNPNYDL"
BASE COUNT 757 a 687 c 836 g 677 t
ORIGIN
1 atggaggagg gaggccggga caaggcgccg gtgcagcccc agcagtctcc agcggcggcc
61 cccggcggca cggacgagaa gccgagcggc aaggagcggc gggatgccgg ggacaaggac
121 aaagaacagg agctgtctga agaggataaa cagcttcaag atgaactgga gatgctcgtg
181 gaacgactag gggagaagga tacatccctg tatcgaccag cgctggagga attgcgaagg
241 cagattcgtt cttctacaac ttccatgact tcagtgccca agcctctcaa atttctgcgt
301 ccacactatg gcaaactgaa ggaaatctat gagaacatgg cccctgggga gaataagcgt
361 tttgctgctg acatcatctc cgttttggcc atgaccatga gtggggagcg tgagtgcctc
421 aagtatcggc tagtgggctc ccaggaggaa ttggcatcat ggggtcatga gtatgtcagg
481 catctggcag gagaagtggc taaggagtgg caggagctgg atgacgcaga gaaggtccag
541 cgggagcctc tgctcactct ggtgaaggaa atcgtcccct ataacatggc ccacaatgca
601 gagcatgagg cttgcgacct gcttatggaa attgagcagg tggacatgct ggagaaggac
661 attgatgaaa atgcatatgc aaaggtctgc ctttatctca ccagttgtgt gaattacgtg
721 cctgagcctg agaactcagc cctactgcgt tgtgccctgg gtgtgttccg aaagtttagc
781 cgcttccctg aagctctgag attggcattg atgctcaatg acatggagtt ggtagaagac
841 atcttcacct cctgcaagga tgtggtagta cagaaacaga tggcattcat gctaggccgg
901 catggggtgt tcctggagct gagtgaagat gtcgaggagt atgaggacct gacagagatc
961 atgtccaatg tacagctcaa cagcaacttc ttggccttag ctcgggagct ggacatcatg
1021 gagcccaagg tgcctgatga catctacaaa acccacctag agaacaacag gtttgggggc
1081 agtggctctc aggtggactc tgcccgcatg aacctggcct cctcttttgt gaatggcttt
1141 gtgaatgcag cttttggcca agacaagctg ctaacagatg atggcaacaa atggctttac
1201 aagaacaagg accacggaat gttgagtgca gctgcatctc ttgggatgat tctgctgtgg
1261 gatgtggatg gtggcctcac ccagattgac aagtacctgt actcctctga ggactacatt
1321 aagtcaggag ctcttcttgc ctgtggcata gtgaactctg gggtccggaa tgagtgtgac
1381 cctgctctgg cactgctctc agactatgtt ctccacaaca gcaacaccat gagacttggt
1441 tccatctttg ggctaggctt ggcttatgct ggctcaaatc gtgaagatgt cctaacactg
1501 ctgctgcctg tgatgggaga ttcaaagtcc agcatggagg tggcaggtgt cacagcttta
1561 gcctgtggaa tgatagcagt agggtcctgc aatggagatg taacttccac tatccttcag
1621 accatcatgg agaagtcaga gactgagctc aaggatactt atgctcgttg gcttcctctt
1681 ggactgggtc tcaaccacct ggggaagggt gaggccatcg aggcaatcct ggctgcactg
1741 gaggttgtgt cagagccatt ccgcagtttt gccaacacac tggtggatgt gtgtgcatat
1801 gcaggctctg ggaatgtgct gaaggtgcag cagctgctcc acatttgtag cgaacacttt
1861 gactccaaag agaaggagga agacaaagac aagaaggaaa agaaagacaa ggacaagaag
1921 gaagcccctg ctgacatggg agcacatcag ggagtggctg ttctggggat tgcccttatt
1981 gctatggggg aggagattgg tgcagagatg gcattacgaa cctttggcca cttgctgaga
2041 tatggggagc ctacactccg gagggctgta cctttagcac tggccctcat ctctgtttca
2101 aatccacgac tcaacatcct ggatacccta agcaaattct ctcatgatgc tgatccagaa
2161 gtttcctatt actccatttt tgccatgggc atggtgggca gtggtaccaa taatgcccgt
2221 ctggctgcaa tgctgcgcca gttagctcaa tatcatgcca aggacccaaa caacctcttc
2281 atggtgcgct tggcacaggg cctgacacat ttagggaagg gcacccttac cctctgcccc
2341 taccacagcg accggcagct tatgagccag gtggccgtgg ctggactgct cactgtgctt
2401 gtctctttcc tggatgttcg aaacattatt ctaggcaaat cacactatgt attgtatggg
2461 ctggtggctg ccatgcagcc ccgaatgctg gttacgtttg atgaggagct gcggccattg
2521 ccagtgtctg tccgtgtggg ccaggcagtg gatgtggtgg gccaggctgg caagccgaag
2581 actatcacag ggttccagac gcatacaacc ccagtgttgt tggcccacgg ggaacgggca
2641 gaattggcca ctgaggagtt tcttcctgtt acccccattc tggaaggttt tgttatcctt
2701 cggaagaacc ccaattatga tctctaagtg accaccaggg gctctgaact gcagctgatg
2761 ttatcagcag gccatgcatc ctgctgccaa gggtggacac ggctgcagac ttctggggga
2821 attgtcgcct cctgctcttt tgttactgag tgagataagg ttgttcaata aagactttta
2881 tccccaaggt caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2941 aaaaaaaaaa aaaaaaa
//