LOCUS BC007720 2855 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens 5-hydroxytryptamine (serotonin) receptor 1D, mRNA (cDNA clone MGC:12645 IMAGE:4299633), complete cds. ACCESSION BC007720 VERSION BC007720.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2855) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2855) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC007720.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 17 Row: m Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39725667. FEATURES Location/Qualifiers source 1..2855 /db_xref="H-InvDB:HIT000033399" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12645 IMAGE:4299633" /tissue_type="Eye, normal, pigmented retinal epithelium" /clone_lib="NIH_MGC_43" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2855 /gene="HTR1D" /gene_synonym="5-HT1D" /gene_synonym="HT1DA" /gene_synonym="HTR1DA" /gene_synonym="RDC4" /db_xref="GeneID:3352" /db_xref="HGNC:HGNC:5289" /db_xref="MIM:182133" CDS 511..1644 /gene="HTR1D" /gene_synonym="5-HT1D" /gene_synonym="HT1DA" /gene_synonym="HTR1DA" /gene_synonym="RDC4" /codon_start=1 /product="5-hydroxytryptamine (serotonin) receptor 1D" /protein_id="AAH07720.1" /db_xref="GeneID:3352" /db_xref="HGNC:HGNC:5289" /db_xref="MIM:182133" /translation="MSPLNQSAEGLPQEASNRSLNATETSEAWDPRTLQALKISLAVV LSVITLATVLSNAFVLTTILLTRKLHTPANYLIGSLATTDLLVSILVMPISIAYTITH TWNFGQILCDIWLSSDITCCTASILHLCVIALDRYWAITDALEYSKRRTAGHAATMIA IVWAISICISIPPLFWRQAKAQEEMSDCLVNTSQISYTIYSTCGAFYIPSVLLIILYG RIYRAARNRILNPPSLYGKRFTTAHLITGSAGSSLCSLNSSLHEGHSHSAGSPLFFNH VKIKLADSALERKRISAARERKATKILGIILGAFIICWLPFFVVSLVLPICRDSCWIH PALFDFFTWLGYLNSLINPIIYTVFNEEFRQAFQKIVPFRKAS" BASE COUNT 665 a 747 c 634 g 809 t ORIGIN 1 ctaaatccag aatcgtttca attactgtga ggggaattct gaagttctca ttaaacacac 61 gaatgtctca agctttgaaa agagccagat gccaaaggca agaatcccag ggcattgccc 121 acctgggtgt gatcccctga taattgtcta acaaattcag catgtgtccc ctgggcatga 181 ccatctgctg ggaaaagttc caggaccctg agacatcttg ggattcctgt ggtttaggaa 241 agacctttaa ctaccagctg gtagttgtct cagcattctt caaatagtcc ggtcttgttt 301 aatattatta ttattattgt tatttaattt tattttattg caactgtact tagagaatag 361 tctggtcttg agaccttttc actgtggtct gttctggtgt acggctccca ccagtgtgaa 421 gcagaaggat gactttgctc tgttgtcagg acaaccttga aggaaggagc caaatgtgtg 481 gaggtctgtg ggaagagaga gccacctagc atgtccccac tgaaccagtc agcagaaggc 541 cttccccagg aggcctccaa cagatccctg aatgccacag aaacctcaga ggcttgggat 601 cccaggaccc tccaggcgct caagatctcc cttgccgtgg tcctttccgt catcacactg 661 gccacagtcc tctccaatgc ctttgtactc accaccatct tactcaccag gaagctccac 721 acccctgcca actacctgat tggctccctg gccaccaccg acctcttggt ttccatcttg 781 gtaatgccca tcagcatcgc ctataccatc acccacacct ggaactttgg ccaaatcttg 841 tgtgacatct ggctgtcctc tgacatcacg tgctgcacag cctccatcct gcatctctgt 901 gtcattgctc tggacaggta ctgggcaatc acagatgccc tggaatacag taaacgcagg 961 acggctggcc acgcggccac catgatcgcc attgtctggg ccatctccat ctgcatctcc 1021 atccccccgc tcttctggcg gcaggccaag gcccaggagg agatgtcgga ctgtctggtg 1081 aacacctctc agatttccta caccatctac tccacctgtg gggccttcta cattccctcg 1141 gtgttgctca tcatcctata tggccggatc taccgggctg cccggaaccg catcctgaat 1201 ccaccctcac tctatgggaa gcgcttcacc acggcccacc tcatcacagg ctctgccggg 1261 tcctcgctct gctcgctcaa ctccagcctc catgaggggc actcgcactc ggctggctcc 1321 cctctctttt tcaaccacgt gaaaatcaag cttgctgaca gtgccctgga acgcaagagg 1381 atttctgctg ctcgagaaag gaaagccact aaaatcctgg gcatcattct gggggccttt 1441 atcatctgct ggctgccctt cttcgtggtg tctctggtcc tccccatctg ccgggactcc 1501 tgctggatcc acccggcgct ctttgacttc ttcacctggc taggctattt aaactccctc 1561 atcaatccaa taatctacac tgtgtttaat gaagagtttc ggcaagcttt tcagaaaatt 1621 gtccctttcc ggaaggcctc ctagtcttat tcggtgatga ctcttgttat cttttgtgtc 1681 ctgtaacctc atcgggattg tctttttttt ttaattattt tctgagactt ggattaattc 1741 atggtatctt gagtcttggt tcaatcaaca gaattgttct ttttcctgtt gttttcttaa 1801 cttctgaaag agctgtgggt ggtggggggc ggggggcagg actgaagatt tcactactta 1861 gcataatatt ttctttcttt tttttttttt ttgagacgga gtcttgccct ctcgccaggc 1921 tggagtgtag tggcacaatc tcagctcact gcaacctccg catcccgggt tcaagagatt 1981 ctgcctcagc ctccagagta gctgggacta caaacgtgtg tcaccaggcc cagctaattt 2041 ttgtattttt aataaagacg gggtttcatc atgttggcca gggtggtctc gatctcttga 2101 cctcgtgatc cgcccgcctc agcatcccaa agtgctggga ttacaggcat gagccactgt 2161 gcctggccaa cataatgttt tcacagttcc tctttgttgg aagaagtgtg tgacctacaa 2221 gattcctggt tgatacagtt caggtgagaa actgtttgat tatagaaaag accccagact 2281 cagagggaag gctctctggt ctacctgaga tctatatgga gcttaaagga gggtgaataa 2341 gattaatgac ctgaattgaa agagaatttg gagccaggat gggtctccat tctgtgtggc 2401 accttgattg gaaaataata tccatgcgtt tcttccactg agtctttctt agattaaatc 2461 tctcccagtt gtccgtgaag agaaagacag tatttgcagt gccgatgata tagagtgact 2521 tggagagaga ttcagaagtt aggggtagcg ggggtaggat ggttgggacc agattgacta 2581 ccctgtaccc ttccttcttc cccaatatgc ctgcgccatc ttcacattct gaagttgaaa 2641 cccatgatca cccctttgag gtagattgac cggctttaga cgcccacccc ccacccaccg 2701 caagctttga gtgggacacc attctgaatt ttttttctga attttttttt aacatctctt 2761 tctcattaga gatctgaaaa ctcattagag atgttgagtc ttatcaaata aaaagcatga 2821 gacatcatgg ccaaaaaaaa aaaaaaaaaa aaaaa //