LOCUS BC007612 2775 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens prosaposin, mRNA (cDNA clone MGC:15695 IMAGE:3351606), complete cds. ACCESSION BC007612 VERSION BC007612.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2775) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2775) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 22 Row: n Column: 2. FEATURES Location/Qualifiers source 1..2775 /db_xref="H-InvDB:HIT000033332" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15695 IMAGE:3351606" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2775 /gene="PSAP" /db_xref="GeneID:5660" /db_xref="HGNC:HGNC:9498" /db_xref="MIM:176801" CDS 19..1593 /gene="PSAP" /codon_start=1 /product="prosaposin" /protein_id="AAH07612.1" /db_xref="GeneID:5660" /db_xref="HGNC:HGNC:9498" /db_xref="MIM:176801" /translation="MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGA VKHCLQTVWNKPTVKSLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNM SASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIP ELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTF VQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMMHMQPKEICALVGFCDEVKE MPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKT EKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR LPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQ CDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNTET AAQCNAVEHCKRHVWN" BASE COUNT 628 a 695 c 785 g 667 t ORIGIN 1 gcggagtcag acggtgctat gtacgccctc ttcctcctgg ccagcctcct gggcgcggct 61 ctagccggcc cggtccttgg actgaaagaa tgcaccaggg gctcggcagt gtggtgccag 121 aatgtgaaga cggcgtccga ctgcggggca gtgaagcact gcctgcagac cgtttggaac 181 aagccaacag tgaaatccct tccctgcgac atatgcaaag acgttgtcac cgcagctggt 241 gatatgctga aggacaatgc cactgaggag gagatccttg tttacttgga gaagacctgt 301 gactggcttc cgaaaccgaa catgtctgct tcatgcaagg agatagtgga ctcctacctc 361 cctgtcatcc tggacatcat taaaggagaa atgagccgtc ctggggaggt gtgctctgct 421 ctcaacctct gcgagtctct ccagaagcac ctagcagagc tgaatcacca gaagcagctg 481 gagtccaata agatcccaga gctggacatg actgaggtgg tggccccctt catggccaac 541 atccctctcc tcctctaccc tcaggacggc ccccgcagca agccccagcc aaaggataat 601 ggggacgttt gccaggactg cattcagatg gtgactgaca tccagactgc tgtacggacc 661 aactccacct ttgtccaggc cttggtggaa catgtcaagg aggagtgtga ccgcctgggc 721 cctggcatgg ccgacatatg caagaactat atcagccagt attctgaaat tgctatccag 781 atgatgatgc acatgcaacc caaggagatc tgtgcgctgg ttgggttctg tgatgaggtg 841 aaagagatgc ccatgcagac tctggtcccc gccaaagtgg cctccaagaa tgtcatccct 901 gccctggaac tggtggagcc cattaagaag cacgaggtcc cagcaaagtc tgatgtttac 961 tgtgaggtgt gtgaattcct ggtgaaggag gtgaccaagc tgattgacaa caacaagact 1021 gagaaagaaa tactcgacgc ttttgacaaa atgtgctcga agctgccgaa gtccctgtcg 1081 gaagagtgcc aggaggtggt ggacacgtac ggcagctcca tcctgtccat cctgctggag 1141 gaggtcagcc ctgagctggt gtgcagcatg ctgcacctct gctctggcac gcggctgcct 1201 gcactgaccg ttcacgtgac tcagccaaag gacggtggct tctgcgaagt gtgcaagaag 1261 ctggtgggtt atttggatcg caacctggag aaaaacagca ccaagcagga gatcctggct 1321 gctcttgaga aaggctgcag cttcctgcca gacccttacc agaagcagtg tgatcagttt 1381 gtggcagagt acgagcccgt gctgatcgag atcctggtgg aggtgatgga tccttccttc 1441 gtgtgcttga aaattggagc ctgcccctcg gcccataagc ccttgttggg aactgagaag 1501 tgtatatggg gcccaagcta ctggtgccag aacacagaga cagcagccca gtgcaatgct 1561 gtcgagcatt gcaaacgcca tgtgtggaac taggaggagg aatattccat cttggcagaa 1621 accacagcat tggttttttt ctacttgtgt gtctggggga atgaacgcac agatctgttt 1681 gactttgtta taaaaatagg gctcccccac ctcccccatt tctgtgtcct ttattgtagc 1741 attgctgtct gcaagggagc ccctagcccc tggcagacat agctgcttca gtgccccttt 1801 tctctctgct agatggatgt tgatgcactg gaggtctttt agcctgccct tgcatggcgc 1861 ctgctggagg aggagagagc tctgctggca tgagccacag tttcttgact ggaggccatc 1921 aaccctcttg gttgaggcct tgttctgagc cctgacatgt gcttgggcac tggtgggcct 1981 gggcttctga ggtggcctcc tgccctgatc agggaccctc cccgctttcc tgggcctctc 2041 agttgaacaa agcagcaaaa caaaggcagt tttatatgaa agattagaag cctggaataa 2101 tcaggctttt taaatgatgt aattcccact gtaatagcat agggattttg gaagcagctg 2161 ctggtggctt gggacatcag tggggccaag ggttctctgt ccctggttca actgtgattt 2221 ggctttcccg tgtctttcct ggtgatgcct tgtttggggt tctgtgggtt tgggtgggaa 2281 gagggccatc tgcctgaatg taacctgcta gctctccgaa ggccctgcgg gcctggcttg 2341 tgtgagcgtg tggacagtgg tggccgcgct gtgcctgctc gtgttgccta catgtccctg 2401 gctgttgagg cgctgcttca gcctgcaccc ctcccttgtc tcatagatgc tccttttgac 2461 cttttcaaat aaatatggat ggcaagctcc taggcctctg gcttcctggt agagggcggc 2521 atgccgaagg gtctgctggg tgtggattgg atgctggggt gtgggggttg gaagctgtct 2581 gtggcccact tgggcaccca cgcttctgtc cacttctggt tgccaggaga cagcaagcaa 2641 agccagcagg acatgaagtt gctattaaat ggacttcgtg atttttgttt tgcactaaag 2701 tttctgtgat ttaacaataa aattctgtta gccagaaaaa aaaaaaaaaa aaaaaaaaaa 2761 aaaaaaaaaa aaaaa //