LOCUS BC007446 1574 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger, CCHC domain containing 17, mRNA (cDNA
clone MGC:4523 IMAGE:3009823), complete cds.
ACCESSION BC007446
VERSION BC007446.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1574)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1574)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007446.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: c Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361575.
FEATURES Location/Qualifiers
source 1..1574
/db_xref="H-InvDB:HIT000033229"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4523 IMAGE:3009823"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1574
/gene="ZCCHC17"
/gene_synonym="HSPC251"
/gene_synonym="pNO40"
/gene_synonym="PS1D"
/gene_synonym="RP11-266K22.1"
/db_xref="GeneID:51538"
/db_xref="HGNC:HGNC:30246"
CDS 86..811
/gene="ZCCHC17"
/gene_synonym="HSPC251"
/gene_synonym="pNO40"
/gene_synonym="PS1D"
/gene_synonym="RP11-266K22.1"
/codon_start=1
/product="zinc finger, CCHC domain containing 17"
/protein_id="AAH07446.1"
/db_xref="GeneID:51538"
/db_xref="HGNC:HGNC:30246"
/translation="MNSGRPETMENLPALYTIFQGEVAMVTDYGAFIKIPGCRKQGLV
HRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMKVVNQGTGKDLDPNN
VIIEQEERRRRSFQDYTGQKITLEAVLNTTCKKCGCKGHFAKDCFMQPGGTKYSLIPD
EEEEKEEAKSAEFEKPDPTRNPSRKRKKEKKKKKHRDRKSSDSDSSDSESDTGKRARH
TSKDSKAAKKKKKKKKHKKKHKE"
BASE COUNT 485 a 323 c 406 g 360 t
ORIGIN
1 agcgactcgg ggacctggag ctgacgccta gacacttgta ttagctttaa tagaagagaa
61 atggaggagc catagaatat taaggatgaa ttcaggaagg cctgagacca tggaaaactt
121 gcctgctctc tacactattt tccaaggaga ggttgctatg gtgacagact atggggcctt
181 tatcaaaatc ccaggctgtc ggaagcaagg tctggtccat cgaactcata tgtcatcctg
241 tcgggtggat aagccctctg agatagtaga tgttggagat aaagtgtggg tgaagcttat
301 tggccgagag atgaaaaatg atagaataaa agtatccctc tccatgaagg ttgtcaatca
361 agggactggg aaagaccttg atcccaacaa tgttatcatt gagcaagaag agaggcggag
421 gcgatccttc caggattaca ctgggcagaa gatcaccctt gaggctgtct tgaacactac
481 ctgcaagaag tgtggctgta aaggccactt tgcaaaagat tgtttcatgc aaccaggtgg
541 gactaaatac tctctgatac ctgatgagga agaggaaaag gaagaggcaa agtcagcaga
601 gtttgagaag cctgacccta caaggaatcc ttctagaaaa agaaagaagg agaagaagaa
661 aaagaaacat agagatagga agtcatctga ctctgacagc tcagactctg agagtgatac
721 aggcaagagg gcaaggcaca catcaaaaga cagcaaggca gcaaagaaga agaaaaagaa
781 gaagaagcac aagaagaagc acaaggagtg agagtataaa gagtgtaggg ggtggttgag
841 agtaagaaac caggagcctt gtgccttgag actcctggaa agactcaata gtgagaatat
901 agcctcccac cccattaact tcgctcccat gggagatggc ttcccctcat gcaacaggca
961 ggtttgggag ttagaggtca aaagcagctg cctgaatgag ttgttgtttc cttatcactc
1021 ctggtccctt tgcaagtgaa ccctgcagct cacccattca ttcacccaac ttccttcatt
1081 cagcaggagg ccctattacc ctctccagct gccactgcca gagctggatt cctgtaaagg
1141 agtccaggct agagccacag agactgttgt ggaggtgagt tcggctgtag ttagagtgat
1201 tggacccttc ctattggtct gtcctgggcc aactggtggg tgatctctgc tgcatccaac
1261 atgggagcag agactggcag caggaggggg gaacatggtg agaagtggtg ctcacttttc
1321 ccattcctcc taacatagtt ctactatgct agaagtggca tccagcggcc acagctagaa
1381 aacagtctgc agtgtgactt aacttgtgta ttgcattcca gcagaccact gaaccagaca
1441 gcgaagccaa gatcattgtt ctactttgta tttactactg tgtgaatcag ttgattctac
1501 ttcaggtcct tgcttaaatt cctgtcacta aatggaaatg tgtttggttt taaaaaaaaa
1561 aaaaaaaaaa aaaa
//