LOCUS BC007310 1192 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 414, mRNA (cDNA clone MGC:15716
IMAGE:3353224), complete cds.
ACCESSION BC007310
VERSION BC007310.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1192)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1192)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: o Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14150190.
FEATURES Location/Qualifiers
source 1..1192
/db_xref="H-InvDB:HIT000033136"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15716 IMAGE:3353224"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1192
/gene="ZNF414"
/gene_synonym="MGC15716"
/gene_synonym="Zfp414"
/db_xref="GeneID:84330"
/db_xref="HGNC:HGNC:20630"
CDS 103..1041
/gene="ZNF414"
/gene_synonym="MGC15716"
/gene_synonym="Zfp414"
/codon_start=1
/product="zinc finger protein 414"
/protein_id="AAH07310.1"
/db_xref="GeneID:84330"
/db_xref="HGNC:HGNC:20630"
/translation="MEEKPSGPIPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEE
PGPEQAATPPVWERGGAGGMRQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRR
PPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQ
ELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPALDREPP
APERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAA
PGPPASSAAVWKKSQGAGSSPRRPQGGSDAPSGACR"
BASE COUNT 224 a 455 c 342 g 171 t
ORIGIN
1 atggcgctga cgtgagcgcg aactcgcact gcccagaggg tggccgccgc ctaagctgca
61 gccgccggag ccgcagaaac aagaggccga gccgtgtcga agatggagga gaaaccctca
121 gggcccatcc cagacatgct ggccactgca gagcccagct ccagtgagac cgacaaggag
181 gtgttgtccc cggctgtgcc agctgcagcc ccttcctcct ccatgtcgga ggagccaggc
241 cctgagcagg cagccacacc gccagtgtgg gaacgtggag gggctggagg gatgcggcag
301 ggctcctccc cagccccaga cagctgccag cctggccccg gacccagccc tggcctgacc
361 agcatagtct ccgggaccag cgaggacctg cggcctccca gacgacgccc acctccaggg
421 aagcaaatcc cttgctccag ccctggctgc tgcctcagtt ttcccagcgt ccgtgacctg
481 gcacagcatc tgcgaaccca ctgcccgccc acacagtccc tggaaggcaa gctcttccgc
541 tgctcagccc tgagctgcac cgagaccttc cccagcatgc aggagctggt ggctcacagc
601 aaactgcact acaaacccaa tcgctacttc aagtgtgaga actgcctcct gcgcttccgc
661 acgcaccgct cgctcttcaa gcacctgcat gtttgcgcgg agcatgcgca gagcccagcc
721 ccgccgccac ccccggccct ggaccgagag ccgcccgcgc cggagcgccc cccggaggtt
781 gaccccgcat cagcgccggg cctgccgttc ccgctgctgg aacccttcac gacccccgcc
841 cctgccccca ccggaccgtt cctgccctac ttgaaccctg cgccctttgg cctaagcccc
901 ccgcgcctgc gccccttcct ggccgctgca cccgggccgc cggcttccag cgccgccgtc
961 tggaaaaaga gccaaggtgc tggcagcagc ccccgaagac cccagggcgg ctccgacgcg
1021 ccctcaggtg cgtgcaggtg accaccaggg aggggtggag gggctttctt tcctgcgccc
1081 tgcggggtcc ggtggatacc aggaggcagc agtgctcatc cccttcccag ggggcacaaa
1141 tgccaccgtc ccgaaataca ggatttttgc cttaaaaaaa aaaaaaaaaa aa
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