LOCUS BC006377 2864 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
Q, mRNA (cDNA clone MGC:12693 IMAGE:4299132), complete cds.
ACCESSION BC006377
VERSION BC006377.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2864)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2864)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006377.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: m Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538449.
FEATURES Location/Qualifiers
source 1..2864
/db_xref="H-InvDB:HIT000032795"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12693 IMAGE:4299132"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2864
/gene="PIGQ"
/gene_synonym="c407A10.1"
/gene_synonym="GPI1"
/gene_synonym="hGPI1"
/gene_synonym="MGC12693"
/db_xref="GeneID:9091"
/db_xref="HGNC:HGNC:14135"
/db_xref="MIM:605754"
CDS 89..2371
/gene="PIGQ"
/gene_synonym="c407A10.1"
/gene_synonym="GPI1"
/gene_synonym="hGPI1"
/gene_synonym="MGC12693"
/codon_start=1
/product="phosphatidylinositol glycan anchor biosynthesis,
class Q"
/protein_id="AAH06377.1"
/db_xref="GeneID:9091"
/db_xref="HGNC:HGNC:14135"
/db_xref="MIM:605754"
/translation="MVLKAFFPTCCVSTDSGLLVGRWVPEQSSAVVLAVLHFPFIPIQ
VKQLLAQVRQASQVGVAVLGTWCHCRQEPEESLGRFLESLGAVFPHEPWLRLCRERGG
TFWSCEATHRQAPTAPGAPGEDQVMLIFYDQRQVLLSQLHLPTVLPDRQAGATTASTG
GLAAVFDTVARSEVLFRSDRFDEGPVRLSHWQSEGVEASILAELARRASGPICLLLAS
LLSLVSAVSACRVFKLWPLSFLGSKLSTCEQLRHRLEHLTLIFSTRKAENPAQLMRKA
NTVASVLLDVALGLMLLSWLHGRSRIGHLADALVPVADHVAEELQHLLQWLMGAPAGL
KMNRALDQVLGRFFLYHIHLWISYIHLMSPFVEHILWHVGLSACLGLTVALSLLSDII
ALLTFHIYCFYVYGARLYCLKIHGLSSLWRLFRGKKWNVLRQRVDSCSYDLDQLFIGT
LLFTILLFLLPTTALYYLVFTLLRLLVVAVQGLIHLLVDLINSLPLYSLGLRLCRPYR
LADKPTALQPRGAHLPPPQLWLPPQALLGRPVPQAVPWGAHLPLEAERGQAGLRELLA
RLAPPHGHSQPSALPGWHQLSWRMSCALWTLLCAPEHGRPCYHTLGLEVIGSEQMWGW
PARLAALHHWHCLPWDPLPTCCGHHGGEHSNPRCPEHCPMPTLCTQVQRVRPPQQPQV
EGWSPWGLPSGSALAVGVEGPCQDEPPSPRHPLAPSAEQHPASGGLKQSLTPVPSGPG
PSLPEPHGVYLRMFPGEVAL"
BASE COUNT 447 a 990 c 892 g 535 t
ORIGIN
1 gtctgcccgg gcccgcccat cggggtcccc aaccccatcc ggaccccgcc gcccgagcgc
61 gcggccccgg aagcacccgc ctcccggcat ggtgctcaag gccttcttcc ccacgtgctg
121 cgtctcgacg gacagcgggc tgctggtggg acggtgggtg ccggagcaga gcagcgccgt
181 ggtcctggcg gtcctgcact ttcccttcat ccccatccag gtcaagcagc tcctggccca
241 ggtgcggcag gccagccagg tgggcgtggc cgtgctgggc acctggtgcc actgccggca
301 ggagcccgag gagagcctgg gccgcttcct ggagagcctg ggtgctgtct tcccccatga
361 gccctggctg cggctgtgcc gggagagagg cggcacgttc tggagctgcg aggccaccca
421 ccggcaagcg cccactgccc ccggtgcccc tggtgaggac caggtcatgc tcatcttcta
481 tgaccagcgc caggtgttgc tgtcacagct acacctgccc accgtcttgc ccgaccgcca
541 ggctggagcc accactgcca gcacgggggg cctggctgcc gtcttcgaca cggtagcacg
601 cagtgaggtg ctcttccgca gtgaccgctt tgatgagggc cccgtgcggc tgagccactg
661 gcagtcggag ggcgtggagg ccagcatcct cgcggagctg gccaggcgag cctcgggacc
721 catttgcctg ctgttggcca gcctgctgtc gctggtctca gctgtcagtg cctgccgagt
781 gttcaagctc tggcccctgt ccttcctcgg gagcaaactc tccacgtgcg aacagctccg
841 gcaccggctg gagcacctca cgctaatctt cagtacacgg aaggcggaga accctgccca
901 gctgatgagg aaggccaaca cggtggcctc tgtgctgctg gacgtggccc tgggcctcat
961 gctgctgtcc tggctccacg ggagaagccg catcgggcat ctggccgacg ccctcgttcc
1021 tgtggctgac cacgtggccg aggagctcca gcatctgctg cagtggctga tgggtgctcc
1081 cgccgggctc aagatgaacc gtgcactgga ccaggtgctg ggccgcttct tcctctacca
1141 catccacctg tggatcagct acatccacct catgtccccc ttcgtggagc acatcctttg
1201 gcacgtgggc ctctcggcct gcctgggcct gacggtggcc ctgtccctcc tctcggacat
1261 tatcgccctc ctcaccttcc acatctactg cttttacgtc tatggagcca ggctgtactg
1321 cctgaagatc catggcctgt cctcactgtg gcgtctgttc cgggggaaga agtggaacgt
1381 tctgcgccag cgcgtggact cctgttccta tgacctggac cagctgttca tcgggactct
1441 gctcttcacc atcctgctct tcctcctgcc taccacagcc ctgtactacc tggtgttcac
1501 cctgctccgg ctcctggtgg tcgccgtgca gggcctgatc catctgctcg tggacctcat
1561 caactccctg ccgctgtact cactgggtct tcggctctgc cggccctaca ggctggcgga
1621 taaacccact gccctacagc cgcgtggtgc acacctaccg cctccccagc tgtggctgcc
1681 accccaagca ctcctggggc gccctgtgcc gcaagctgtt ccttggggag ctcatctacc
1741 cctggaggca gagaggggac aagcaggact gagggaactg ctggctcgcc tggcaccacc
1801 acacggccac agccagccat ctgctctgcc agggtggcac cagctcagct ggcgcatgtc
1861 ctgtgctttg tggacgctgc tgtgtgctcc tgaacacggc aggccctgct atcacacctt
1921 gggcttggag gtcattggga gtgagcagat gtgggggtgg ccagccaggc tggccgcact
1981 ccatcactgg cactgcctgc cttgggaccc gcttcccacc tgctgcggtc accatggtgg
2041 cgagcacagc aaccccaggt gtccagagca ctgccccatg cccaccctgt gtacccaggt
2101 ccagagggtc cgtccaccac agcagcccca ggtggagggc tggtctccct gggggctccc
2161 cagtggctct gccctggctg tgggggtgga gggaccttgc caggatgaac cccccagtcc
2221 caggcaccct ctagctccct cagccgaaca gcaccctgca tctgggggat tgaagcagtc
2281 gctgaccccc gtccccagcg ggcccgggcc ctcactccct gaaccacacg gggtttattt
2341 gcggatgttc cctggagagg tcgctttgtg aagaaaccat cagcaggctg tgagcatcgc
2401 caggctgctg tgggggcggg agcagcctca gtgtcaaggg cccgcccact gacccagccg
2461 tacctattcg tccacggtgc cccgtagcag caggtcctgc ggccaaatct gtctcccttc
2521 atgggcctcc cagggaagga ggaagccctg ctgtgcagac acctctgtgg ccccccagga
2581 gtgtgagtgg cctggggagg gggccgtggc actgaggccg aaagtgcctg ccagacggca
2641 cggtctgggt gcgggtgttc cctgtgagcc cgagtccgct tcaggagggg agcctgcagg
2701 tgccggctgg tgaggggatg acgcgctgtg ggtgggagga ggcagcgccc atctcagcag
2761 caccaggact gcctgggact ccctggcaac ccagcaccgg ggaagccgtc agctgctgtg
2821 acaataaaac ctgccccgtg tctggaaaaa aaaaaaaaaa aaaa
//