LOCUS BC006211 1899 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens stromal cell derived factor 4, mRNA (cDNA clone MGC:852 IMAGE:3162764), complete cds. ACCESSION BC006211 VERSION BC006211.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1899) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1899) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC006211.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 5 Row: e Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 18699731. FEATURES Location/Qualifiers source 1..1899 /db_xref="H-InvDB:HIT000032672" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:852 IMAGE:3162764" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1899 /gene="SDF4" /gene_synonym="Cab45" /gene_synonym="RP5-902P8.6" /db_xref="GeneID:51150" /db_xref="HGNC:HGNC:24188" CDS 211..1299 /gene="SDF4" /gene_synonym="Cab45" /gene_synonym="RP5-902P8.6" /codon_start=1 /product="stromal cell derived factor 4" /protein_id="AAH06211.1" /db_xref="GeneID:51150" /db_xref="HGNC:HGNC:24188" /translation="MVWPWVAMASRWGPLIGLAPCCLWLLGAVLLMDASARPANHSST RERVANREENEILPPDHLNGVKLEMDGHLNRGFHQEVFLGKDLGGFDEDAEPRRSRRK LMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWD EYKVKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTE EEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDD NWVKDRKKEFEELIDSNHDGIVTAEELESYMDPMNEYNALNEAKQMIAVADENQNHHL EPEEVLKYSEFFTGSKLVDYARSVHEEF" BASE COUNT 398 a 590 c 596 g 315 t ORIGIN 1 cggcgtcact gacgcttcgc tccggtcctc ggatcccgag cgcggggagg cagaccgact 61 gtgagctgct tgtccccatc ctgcggccgt cctggggaca cagagccctc cgtggtgccc 121 ggggattgga ttggagccag gacctcactt cctcctctgc ccctgcccct gcccctccca 181 gcacctggcc cacaccctgc agcccgcccc atggtctggc cctgggtggc gatggcgtcc 241 aggtggggtc ccctcattgg cctggctccg tgctgcctct ggctcctggg ggcagtcctt 301 ctgatggacg cgtctgcacg gcctgccaac cactcgtcca ctcgagagag agtagccaac 361 agggaggaga atgagatcct gcccccagac cacctgaacg gggtgaagct ggagatggac 421 gggcacctca atcgcggctt ccaccaggag gtcttcctag gcaaggacct gggtggcttt 481 gatgaggacg cggagccgcg gcggagccgg aggaagctga tggtcatctt ttccaaggtg 541 gatgtgaaca ctgaccggaa gatcagtgcc aaggagatgc agcgctggat catggagaag 601 acggccgagc acttccagga ggccatggag gagagcaaga cacacttccg cgccgtggac 661 cctgacgggg acggtcacgt gtcttgggac gagtataagg tgaagttttt ggcgagtaaa 721 ggccatagcg agaaggaggt tgccgacgcc atcaggctca acgaggaact caaagtggac 781 gaggaaacac aggaagtcct ggagaacctg aaggaccgct ggtaccaggc ggacagcccc 841 cctgcagacc tgctgctgac ggaggaggag ttcctgtcgt tcctccaccc cgagcacagc 901 cggggaatgc tcaggttcat ggtgaaggag atcgtccggg acctggacca ggacggtgac 961 aagcagctct ctgtgcccga gttcatctcc ctgcccgtgg gcaccgtgga gaaccagcag 1021 ggccaggaca ttgacgacaa ctgggtgaaa gacagaaaaa aggagtttga ggagctcatt 1081 gactccaacc acgacggcat cgtgaccgcc gaggagctgg agagctacat ggaccccatg 1141 aacgagtaca acgcgctgaa cgaggccaag cagatgatcg ccgtcgccga cgagaaccag 1201 aaccaccacc tggagcccga ggaggtgctc aagtacagcg agttcttcac gggcagcaag 1261 ctggtggact acgcgcgcag cgtgcacgag gagttttgag cgcccggccg cgccccgcgc 1321 cgccccccac gcaccaccgg ggcggcctcg cgggtgactc cgggctccgt ggctgtcccg 1381 gaccccacct cttccctgcc gcccgccacc ggccgaccga ccgcggctgc cccagttgat 1441 gagcggcgtg tcccctctgc agcgcgcacc ccggcggggc tttggctgtg acgcggtcgg 1501 ggcgcggggc tgggctgtgg ccccgcggcg ccgcctcctc cctggtccct cgaaatcgtt 1561 gcatctcact tctgagaacg aaatctcgct tcagtcactc tgccgaaggc gctgacggca 1621 tcgcggccgg aacctctggg cccggcccct cccagggccg ccgctccgtg ggaaaaaaca 1681 gctcctccat ttccttgaaa actgaacgat tattaaaaat agattaaact tcgctggaaa 1741 tgagtagcca ggaagttcag gggagggtgc cgggtccttc ccgggcctgg cgtgtcggag 1801 ccacccaggt cccgcagctg ccgctgagaa aatgcaaata tttgttgtga caagaatcac 1861 atacatttac tttaaatata aaaaaaaaaa aaaaaaaaa //