LOCUS BC006205 2098 bp mRNA linear HUM 22-FEB-2007
DEFINITION Homo sapiens zinc finger and SCAN domain containing 18, mRNA (cDNA
clone IMAGE:3533093), partial cds.
ACCESSION BC006205
VERSION BC006205.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2098)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2098)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC006205.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: d Column: 21.
FEATURES Location/Qualifiers
source 1..2098
/db_xref="H-InvDB:HIT000086615"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3533093"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2098
/gene="ZSCAN18"
/db_xref="GeneID:65982"
/db_xref="HGNC:HGNC:21037"
CDS <1..1224
/gene="ZSCAN18"
/codon_start=1
/product="ZSCAN18 protein"
/protein_id="AAH06205.2"
/db_xref="GeneID:65982"
/db_xref="HGNC:HGNC:21037"
/translation="DKVRPWVVAQYPESCKKAASLVEGLADVLEEPGMLLGSPAGSSS
ILSDGVYERHMDPLLLPGELASPSQALGAGEIPAPSETPWLSPDPLFLEQRRVREAKT
EEDGPANTEQKLKSFPEDPQHLGEWGHLDPAEENLKSYRKLLLWGYQLSQPDAASRLD
TEELRLVERDPQGSSLPGGRRQESAGCACEEAAPAGVLPELPTEAPPGDALADPPSGT
TEEEEEQPGKAPDPQDPQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKRPHPEDGDG
QSLEGVSSSGDSAGLEAGQGPGADEPGLSRGKPYACGECGEAFAWLSHLMEHHSSHGG
RKRYACQGCWKTFHFSLALAEHQKTHEKEKSYALGGARGPQPSTREAQAGARAGGPPE
SVEGEAPPAPPEAQR"
BASE COUNT 459 a 610 c 654 g 375 t
ORIGIN
1 gataaggtcc ggccctgggt ggtggcacag taccctgaga gctgcaagaa ggcagcctcc
61 ctggtggagg gcctcgctga tgtcctggaa gagccaggga tgctgctggg ctcccctgcg
121 ggctcatcct caattcttag cgatggagtg tacgagaggc acatggaccc tctgctgcta
181 ccaggcgagc tcgcgagccc cagccaggcc cttggagctg gggagatccc ggcaccttct
241 gagacaccct ggctttctcc ggaccccctg tttctggaac agaggagggt cagagaagca
301 aagaccgaag aggacggccc tgccaacacc gagcagaagc tgaagtcctt tccagaggac
361 cctcagcacc tgggggagtg gggccacctg gaccctgccg aggagaacct gaagagctac
421 cggaagctgc tcctgtgggg gtatcagctt tcccagcctg acgctgcctc caggctggac
481 actgaggaac tccggttggt ggaaagagat ccacaaggaa gcagcctccc aggcgggagg
541 cggcaggaga gcgctgggtg cgcctgcgag gaggccgccc ccgcgggggt gctgcctgag
601 ctgcctacgg aggcgccccc tggggacgcc cttgccgatc ccccgtcggg caccactgag
661 gaggaggaag agcagcctgg gaaggccccg gacccgcagg acccccagga cgcggagtcc
721 gactctgcca ccggatcgca gaggcagtcc gtcatccagc agcctgcccc ggacaggggc
781 acggcgaaac tgggaaccaa gaggccgcac cccgaggatg gggacgggca gagcctcgag
841 ggcgtctcta gctccggcga cagcgcaggg ctggaggccg ggcagggccc tggggctgac
901 gagccgggct tgtcccgcgg gaagccctat gcctgcggcg agtgcgggga ggccttcgcg
961 tggctctcgc acctgatgga gcaccacagc agccatggcg gccggaagcg ctacgcctgt
1021 cagggctgct ggaagacctt ccacttcagc ctggccctag ccgagcacca gaagacccac
1081 gagaaggaga aaagctacgc gctggggggc gcccggggcc cccaaccgtc cacccgcgaa
1141 gcccaggcgg gggctagggc gggcggtccc ccagagagcg tggagggcga ggctcccccc
1201 gcacccccag aggcgcagag gtgagccgct gtgctgtccc gttccggagg ggccgctttg
1261 ccggccgtga atcccagacg aggcattggg cctttccacg cccctgggtg gcggcttcct
1321 gtggtgtttg tggacgtcct ctgcctgtgc cctgaatccg ctcctgaggc taagcgctcc
1381 caacgagaag ggtccacggg aagccctcac ctctgtaaac acaccctggg ccagcgctcg
1441 catccgaggg gagccgccgg atgtggaaga agactcggct ttcctgcagc catttagtgc
1501 cgccccatgc taggttattt gacattgtgc agtgtagagt tgccttaaag tgcgtgatct
1561 gccagtgctt tcttcaagtc acccttgccc cgattcctcc tgtttgcgct ccccagggtt
1621 gctcaagtgg aaattttgtc agctgtttag ccttttcgta cttggcgtga tgtcaacttc
1681 acttctaatc tgcaaaagca gaagctgttt cctagtttac ctcgcgtgtg tttacctata
1741 tggagtagct cgcagagatc acagaaatgc ttgcagccta aggcagggtt ttcagaccgt
1801 gggtcccagc ccatttagta aaatgggaaa tcaattagca agtggtcacc agcattacac
1861 agcaatgaag cagaataaag taggccagaa tgcatcatgt agtaaaggca aatactgttt
1921 tgtgaaactt ttcacccata catctaaatg tgagaactgg ttgcaatgta agacatttct
1981 tgctgggaag ttgtgagcaa aataagttga aaacactaat aaagatctgt ctgtctgagc
2041 aaaggagact aaactccttg ggctacaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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