LOCUS BC005968 1492 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens thioredoxin domain containing 9, mRNA (cDNA clone
MGC:14620 IMAGE:4073821), complete cds.
ACCESSION BC005968
VERSION BC005968.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1492)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1492)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47419912.
FEATURES Location/Qualifiers
source 1..1492
/db_xref="H-InvDB:HIT000032562"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14620 IMAGE:4073821"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1492
/gene="TXNDC9"
/gene_synonym="APACD"
/db_xref="GeneID:10190"
/db_xref="HGNC:HGNC:24110"
CDS 128..808
/gene="TXNDC9"
/gene_synonym="APACD"
/codon_start=1
/product="thioredoxin domain containing 9"
/protein_id="AAH05968.1"
/db_xref="GeneID:10190"
/db_xref="HGNC:HGNC:24110"
/translation="MEADASVDMFSKVLEHQLLQTTKLVEEHLDSEIQKLDQMDEDEL
ERLKEKRLQALRKAQQQKQEWLSKGHGEYREIPSERDFFQEVKESENVVCHFYRDSTF
RCKILDRHLAILSKKHLETKFLKLNVEKAPFLCERLHIKVIPTLALLKDGKTQDYVVG
FTDLGNTDDFTTETLEWRLGSSDILNYSGNLMEPPFQNQKKFGTNFTKLEKKTIRGKK
YDSDSDDD"
BASE COUNT 511 a 265 c 279 g 437 t
ORIGIN
1 gcagccgccg gcagctactg caaggcaaaa gccggagtgg acgtgtcttt tgaaactgct
61 gctctttcac ttctcaggcg tcaccgagag ctcagcaccc aggctgaact ctgtaccatt
121 tggaagaatg gaagctgatg catctgttga catgttttcc aaagtcctgg agcatcagct
181 gcttcagact accaaactgg tggaagaaca tttggattct gaaattcaaa aactggatca
241 gatggatgag gatgaattgg aacgccttaa agaaaagaga ctccaggcac taaggaaagc
301 tcaacagcag aaacaagaat ggctttctaa aggacatggg gaatacagag aaatccctag
361 tgaaagagac ttttttcaag aagtcaagga gagtgaaaat gtggtttgcc atttctacag
421 agactccaca ttcaggtgta aaatactaga cagacatctg gcaatattgt ccaagaaaca
481 cctcgagacc aaatttttga agctgaatgt ggaaaaagca cctttccttt gtgagagact
541 gcatatcaaa gtcattccca cactagcact gctaaaagat gggaaaacac aagattatgt
601 tgttgggttt actgacctag gaaatacaga tgacttcacc acagaaactt tagaatggag
661 gctcggttct tctgacattc ttaattacag tggaaattta atggagccac catttcagaa
721 ccaaaagaaa tttggaacaa acttcacaaa gctggaaaag aaaactatcc gaggaaagaa
781 atatgattca gactctgatg atgattagag ctcaataatt ctttgtaaat tgtctttttt
841 tttctgcttc agatttaaat gtgtttttaa aattctatta atgtctatac attggtcacc
901 taaatactca tattctcgag ttttatacag ttgtatcaca tcgaaaagtg tctttactgt
961 tttctgtgtg gccatcatgt ttaagttgag gaaaactcag ttcttaaatt atctgggaag
1021 ggtctggatt ctctattttt gagattgact ttatcacaat atgattctta catctttata
1081 ccatttacaa ttgtgtttta gatctacaga gttagaaatt cgaaaactat tccaggacta
1141 attcttaatc ggcattattt atacaagagg tcaagtaaca tttactagcg caatactgca
1201 cttgtaaatg aattataaac gctcttctgg aatatattta aataaccatt aaagaactgc
1261 ttattcattc tggacactgc atgttgatgt tgaatcaact gatgccagca gaaagctatt
1321 ttgatttgtg aacatactgc cttatttaaa gggtcctgat tgcttgtatt ttaagacatt
1381 cattaaaaag aaaccaggaa acacttttga aataacagca taaggaactt cactgtctct
1441 gctcaataaa atacctgtaa cttaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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