LOCUS BC005292 1370 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chemokine (C-X-C motif) ligand 11, mRNA (cDNA clone MGC:12356 IMAGE:3934139), complete cds. ACCESSION BC005292 VERSION BC005292.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1370) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1370) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 16 Row: j Column: 19. FEATURES Location/Qualifiers source 1..1370 /db_xref="H-InvDB:HIT000032351" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12356 IMAGE:3934139" /tissue_type="Liver" /clone_lib="NIH_MGC_76" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1370 /gene="CXCL11" /gene_synonym="b-R1" /gene_synonym="H174" /gene_synonym="I-TAC" /gene_synonym="IP-9" /gene_synonym="IP9" /db_xref="GeneID:6373" /db_xref="HGNC:HGNC:10638" /db_xref="MIM:604852" CDS 61..345 /gene="CXCL11" /gene_synonym="b-R1" /gene_synonym="H174" /gene_synonym="I-TAC" /gene_synonym="IP-9" /gene_synonym="IP9" /codon_start=1 /product="chemokine (C-X-C motif) ligand 11" /protein_id="AAH05292.1" /db_xref="GeneID:6373" /db_xref="HGNC:HGNC:10638" /db_xref="MIM:604852" /translation="MSVKGMAIALAVILCATVVQGFPMFKRGRCLCIGPGVKAVKVAD IEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKKVERKNF" BASE COUNT 495 a 224 c 243 g 408 t ORIGIN 1 gaagagcagc aaagctgaag tagcagcaac agcaccagca gcaacagcaa aaaaacaaac 61 atgagtgtga agggcatggc tatagccttg gctgtgatat tgtgtgctac agttgttcaa 121 ggcttcccca tgttcaaaag aggacgctgt ctttgcatag gccctggggt aaaagcagtg 181 aaagtggcag atattgagaa agcctccata atgtacccaa gtaacaactg tgacaaaata 241 gaagtgatta ttaccctgaa agaaaataaa ggacaacgat gcctaaatcc caaatcgaag 301 caagcaaggc ttataatcaa aaaagttgaa agaaagaatt tttaaaaata tcaaaacata 361 tgaagtcctg gaaaagggca tctgaaaaac ctagaacaag tttaactgtg actactgaaa 421 tgacaagaat tctacagtag gaaactgaga cttttctatg gttttgtgac tttcaacttt 481 tgtacagtta tgtgaaggat gaaaggtggg tgaaaggacc aaaaacagaa atacagtctt 541 cctgaatgaa tgacaatcag aattccactg cccaaaggag tccaacaatt aaatggattt 601 ctaggaaaag ctaccttaag aaaggctggt taccatcgga gtttacaaag tgctttcacg 661 ttcttacttg ttgtattata cattcatgca tttctaggct agagaacctt ctagatttga 721 tgcttacaac tattctgttg tgactatgag aacatttctg tctctagaag ttatctgtct 781 gtattgatct ttatgctata ttactatctg tggttacagt ggagacattg acattattac 841 tggagtcaag cccttataag tcaaaagcat ctatgtgtcg taaagcattc ctcaaacatt 901 ttttcatgca aatacacact tctttcccca aatatcatgt agcacatcaa tatgtaggga 961 aacattctta tgcatcattt ggtttgtttt ataaccaatt cattaaatgt aattcataaa 1021 atgtactatg aaaaaaatta tatgctatgg gatactggca acagtgcaca tatttcataa 1081 ccaaattagc agcaccggtc ttaatttgat gtttttcaac ttttattcat tgagatgttt 1141 tgaagcaatt aggatatgtg tgtttactgt actttttgtt ttgatccgtt tgtataaatg 1201 atagcaatat cttggacaca tttgaaatac aaaatgtttt tgtctaccaa agaaaaatgt 1261 tgaaaaataa gcaaatgtat acctagcaat cacttttact ttttgtaatt ctgtctctta 1321 gaaaaataca taatctaacc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //