LOCUS BC005080 1240 bp mRNA linear HUM 04-JAN-2007 DEFINITION Homo sapiens immediate early response 3, mRNA (cDNA clone MGC:13037 IMAGE:3617088), complete cds. ACCESSION BC005080 VERSION BC005080.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1240) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1240) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 18 Row: g Column: 17. FEATURES Location/Qualifiers source 1..1240 /db_xref="H-InvDB:HIT000032204_05" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13037 IMAGE:3617088" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1240 /gene="IER3" /gene_synonym="DIF-2" /gene_synonym="DIF2" /gene_synonym="GLY96" /gene_synonym="IEX-1" /gene_synonym="IEX-1L" /gene_synonym="IEX1" /gene_synonym="PRG1" /db_xref="GeneID:8870" /db_xref="HGNC:HGNC:5392" /db_xref="MIM:602996" CDS 19..489 /gene="IER3" /gene_synonym="DIF-2" /gene_synonym="DIF2" /gene_synonym="GLY96" /gene_synonym="IEX-1" /gene_synonym="IEX-1L" /gene_synonym="IEX1" /gene_synonym="PRG1" /codon_start=1 /product="immediate early response 3" /protein_id="AAH05080.1" /db_xref="GeneID:8870" /db_xref="HGNC:HGNC:5392" /db_xref="MIM:602996" /translation="MCHSRSCHPTMTILQAPTPAPSTIPGPRRGSGPEIFTFDPLPEP AAAPAGRPSASRGHRKRSRRVLYPRVVRRQLPVEEPNPAKRLLFLLLTIVFCQILMAE EGVPAPLPPEDAPNAASLAPTPVSPVLEPFNLTSEPSDYALDLSTFLQQHPAAF" BASE COUNT 266 a 370 c 342 g 262 t ORIGIN 1 cactccgctc ggctcaccat gtgtcactct cgcagctgcc acccgaccat gaccatcctg 61 caggccccga ccccggcccc ctccaccatc ccgggacccc ggcggggctc cggtcctgag 121 atcttcacct tcgaccctct cccggagccc gcagcggccc ctgccgggcg ccccagcgcc 181 tctcgcgggc accgaaagcg cagccgcagg gttctctacc ctcgagtggt ccggcgccag 241 ctgccagtcg aggaaccgaa cccagccaaa aggcttctct ttctgctgct caccatcgtc 301 ttctgccaga tcctgatggc tgaagagggt gtgccggcgc ccctgcctcc agaggacgcc 361 cctaacgccg catccctggc gcccacccct gtgtcccccg tcctcgagcc ctttaatctg 421 acttcggagc cctcggacta cgctctggac ctcagcactt tcctccagca acacccggcc 481 gccttctaac tgtgactccc cgcactcccc aaaaagaatc cgaaaaacca caaagaaaca 541 ccaggcgtac ctggtgcgcg agagcgtatc cccaactggg acttccgagg caacttgaac 601 tcagaacact acagcggaga cgccacccgg tgcttgaggc gggaccgagg cgcacagaga 661 ccgaggcgca tagagaccga ggcacagccc agctggggct aggcccggtg ggaaggagag 721 cgtcgttaat ttatttctta ttgctcctaa ttaatattta tatgtattta tgtacgtcct 781 cctaggtgat ggagatgtgt acgtaatatt tattttaact tatgcaaggg tgtgagatgt 841 tccccctgct gtaaatgcag gtctcttggt atttattgag ctttgtggga ctggtggaag 901 caggacacct ggaactgcgg caaagtagga gaagaaatgg ggaggactcg ggtgggggag 961 gacgtcccgg ctgggatgaa gtctggtggt gggtcgtaag tttaggaggt gactgcatcc 1021 tccagcatct caactccgtc tgtctactgt gtgagacttc ggcggaccat taggaatgag 1081 atccgtgaga tccttccatc ttcttgaagt cgcctttagg gtggctgcga ggtagagggt 1141 tgggggttgg tgggctgtca cggagcgact gtcgagatcg cctagtatgt tctgtgaaca 1201 caaataaaat tgatttactg tcaaaaaaaa aaaaaaaaaa //