LOCUS BC005001 2661 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens zinc finger CCCH-type containing 12A, mRNA (cDNA clone MGC:4427 IMAGE:2958199), complete cds. ACCESSION BC005001 VERSION BC005001.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2661) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2661) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: j Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13376631. FEATURES Location/Qualifiers source 1..2661 /db_xref="H-InvDB:HIT000032147" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4427 IMAGE:2958199" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2661 /gene="ZC3H12A" /gene_synonym="dJ423B22.1" /gene_synonym="FLJ23231" /gene_synonym="MCPIP" /gene_synonym="RP3-423B22.1" /db_xref="GeneID:80149" /db_xref="HGNC:HGNC:26259" CDS 75..1874 /gene="ZC3H12A" /gene_synonym="dJ423B22.1" /gene_synonym="FLJ23231" /gene_synonym="MCPIP" /gene_synonym="RP3-423B22.1" /codon_start=1 /product="zinc finger CCCH-type containing 12A" /protein_id="AAH05001.1" /db_xref="GeneID:80149" /db_xref="HGNC:HGNC:26259" /translation="MSGPCGEKPVLEASPTMSLWEFEDSHSRQGTPRPGQELAAEEAS ALELQMKVDFFRKLGYSSTEIHSVLQKLGVQADTNTVLGELVKHGTATERERQTSPDP CPQLPLVPRGGGTPKAPNLEPPLPEEEKEGSDLRPVVIDGSNVAMSHGNKEVFSCRGI LLAVNWFLERGHTDITVFVPSWRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGG KRVVCYDDRFIVKLAYESDGIVVSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMP PDDPLGRHGPSLDNFLRKKPLTLEHRKQPCPYGRKCTYGIKCRFFHPERPSCPQRSVA DELRANALLSPPRAPSKDKNGRRPSPSSQSSSLLTESEQCSLDGKKLGAQASPGSRQE GLTQTYAPSGRSLAPSGGSGSSFGPTDWLPQTLDSLPYVSQDCLDSGIGSLESQMSEL WGVRGGGPGEPGPPRAPYTGYSPYGSELPATAAFSAFGRAMGAGHFSVPADYPPAPPA FPPREYWSEPYPLPPPTSVLQEPPVQSPGAGRSPWGRADSLAKEQASVYTKLCGVFPP HLVEAVMGRFPQLLDPQQLAAEILSYKSQHPSE" BASE COUNT 549 a 833 c 779 g 500 t ORIGIN 1 tggagacgcc gccggccgcc gctggcgcat ggcgggtagg agctgtggcg cggggccttc 61 caggagtctg agctatgagt ggcccctgtg gagagaagcc tgtcctggaa gccagcccca 121 ccatgagtct gtgggaattt gaggacagcc acagccgtca gggcacccca aggccgggtc 181 aagagctggc cgctgaggag gcctcggccc tggaactgca gatgaaggtg gacttcttcc 241 ggaagctggg ctattcatcc acggagatcc acagcgtcct gcagaagctg ggcgtccagg 301 cagacaccaa cacggtgctg ggtgagctgg tgaaacacgg gacagccacc gagcgggagc 361 gccagacctc accggacccc tgccctcagc tccctctagt cccgcggggt ggtggcaccc 421 ctaaggctcc caacctggag cctccactcc cagaagagga aaaggagggc agcgacctga 481 gaccagtggt catcgatggg agcaacgtgg ccatgagcca tgggaacaag gaggtcttct 541 cctgccgggg catcctgctg gcagtgaact ggtttctgga gcggggccac acagacatca 601 cagtgtttgt gccatcctgg aggaaggagc agcctcggcc cgacgtgccc atcacagacc 661 agcacatcct gcgggaactg gagaagaaga agatcctggt gttcacacca tcacgacgcg 721 tgggtggcaa gcgggtggtg tgctatgacg acagattcat tgtgaagctg gcctacgagt 781 ctgacgggat cgtggtttcc aacgacacat accgtgacct ccaaggcgag cggcaggagt 841 ggaagcgctt catcgaggag cggctgctca tgtactcctt cgtcaatgac aagtttatgc 901 cccctgatga cccactgggc cggcacgggc ccagcctgga caacttcctg cgtaagaagc 961 cactcacttt ggagcacagg aagcagccgt gtccctatgg aaggaaatgc acctatggga 1021 tcaagtgccg attcttccac ccagagcggc caagctgccc ccagcgctct gtggcagatg 1081 agctccgtgc caatgctctc ctctcacccc ccagagcccc aagcaaggac aaaaatggcc 1141 ggcggccttc accttcatcc cagtccagct ctctgctaac agagagtgag cagtgcagcc 1201 tggatgggaa gaagctgggg gcccaggcat ccccagggtc ccgccaagag ggtctaacac 1261 agacctatgc cccatcaggc aggagcctcg cacctagcgg gggcagtggc agcagctttg 1321 ggcccacaga ctggctccca cagacgctgg actcactccc gtacgtctcc caggattgcc 1381 tggactcggg cattggctcc ctggagagcc agatgtcgga actttggggg gttcgaggag 1441 gaggccctgg tgagccgggc ccaccccgag ccccttacac gggctacagt ccctatggat 1501 ctgagctccc agccaccgca gccttctctg cctttggccg ggccatgggt gctggccact 1561 tcagtgtccc tgccgactac ccacccgcgc cccctgcctt tccacctcga gagtactggt 1621 ctgaaccata cccactgccc ccacccacat cagtccttca ggagccccca gtgcagagcc 1681 caggggctgg caggagcccg tggggcaggg cagacagcct ggccaaggag caggccagcg 1741 tgtatactaa gctgtgtggt gtgtttcccc cgcacctggt ggaggctgtg atggggcgct 1801 tcccacagct cctggacccc cagcagctgg ctgccgagat cctctcctac aagtcccagc 1861 accccagtga gtaagctgcc tgtggctggc aagggcagca cccccagcct ccaagggccg 1921 tcaggctggg ctttgggcca ttgagcagcc cattcccagc cctgaggccc accccagagg 1981 ctggacagag ggaggattca agtcgggaag gaaacccaca aaccaaagat actgtaggat 2041 tggttctggc ccatgcagca cctctagctg tctgcctcag tgggtcagaa gcgatcaccc 2101 tgttgataca cattgtatct ctgtagttta aggagacgct gccggtaacg gcgtcggtcc 2161 gtggctgagg cccaaaccgt cttttctctc agagggtggg gagggaggtg ggggcagcag 2221 aggcctgggc tgggtgccct gtgcacgcca ccccacttcc gccctacccc tgggacgttg 2281 gccttggctg gctagttggg caccgtgtgc ctgccctcca agggcctcct ctacgccaat 2341 gaggcctcat ctgtgctctc gctgggcacg tggcttcatg tcagtaagca agatgcttct 2401 taataaccca ccttctgccc cactctattc cttatcctgc tgcccctgta ggggtcaagg 2461 gccctccgtc tacaccctct tcttctcctc catcctttat tcagagtcat ctcgcccttc 2521 cccatgggtg ggggaacctg tgtttgtttg tgtgcacatg taaattttaa atattttaag 2581 cagaaagtcc ttacctcctg taacacatca ataaagtaca atcattgtga gccctttcaa 2641 aaaaaaaaaa aaaaaaaaaa a //