LOCUS BC004952 904 bp mRNA linear HUM 23-JUN-2006
DEFINITION Homo sapiens polycomb group ring finger 1, mRNA (cDNA clone
MGC:10882 IMAGE:3621400), complete cds.
ACCESSION BC004952
VERSION BC004952.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 904)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 904)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: p Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14249239.
FEATURES Location/Qualifiers
source 1..904
/db_xref="H-InvDB:HIT000032106"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10882 IMAGE:3621400"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..904
/gene="PCGF1"
/gene_synonym="2010002K04Rik"
/gene_synonym="MGC10882"
/gene_synonym="NSPC1"
/gene_synonym="RNF3A-2"
/gene_synonym="RNF68"
/db_xref="GeneID:84759"
/db_xref="HGNC:HGNC:17615"
CDS 28..771
/gene="PCGF1"
/gene_synonym="2010002K04Rik"
/gene_synonym="MGC10882"
/gene_synonym="NSPC1"
/gene_synonym="RNF3A-2"
/gene_synonym="RNF68"
/codon_start=1
/product="PCGF1 protein"
/protein_id="AAH04952.1"
/db_xref="GeneID:84759"
/db_xref="HGNC:HGNC:17615"
/translation="MRLRNQLQSVYKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVD
ATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPG
LQDSEEKRIREFYQSRGLDRVTQPTGEEPALSNLGLPFSSFDHSKAHYYRYDEQLNLC
LERLSSGKDKNKSVLQNKYVRCSVRAEVRHLRRVLCHRLMLNPQHVQLLFDNEVLPDH
MTMKQIWLSRWFGKPSPLLLQYSVKEKRR"
BASE COUNT 262 a 233 c 211 g 198 t
ORIGIN
1 cctcaggggg gccagattgc gatcgcgatg aggcttcgga accagctcca gtcagtgtac
61 aagatggacc cgctacggaa cgaggaggag gttcgagtga agatcaaaga cttgaatgaa
121 cacattgttt gctgcctatg cgccggctac ttcgtggatg ccaccaccat cacagagtgt
181 cttcatactt tctgcaagag ttgtattgtg aagtacctcc aaactagcaa gtactgcccc
241 atgtgcaaca ttaagatcca cgagacacag ccactgctca acctcaaact ggaccgggtc
301 atgcaggaca tcgtgtataa gctggtgcct ggcttgcaag acagtgaaga gaaacggatt
361 cgggaattct accagtcccg aggtttggac cgggtcaccc agcccactgg ggaagagcca
421 gcactgagca acctcggcct ccccttcagc agctttgacc actctaaagc ccactactat
481 cgctatgatg agcagttgaa cctgtgcctg gagcggctga gttctggcaa agacaagaat
541 aaaagcgtcc tgcagaacaa gtatgtccga tgttctgtta gagctgaggt acgccatctc
601 cggagggtcc tgtgtcaccg cttgatgcta aaccctcagc atgtgcagct cctttttgac
661 aatgaagttc tccctgatca catgacaatg aagcagatat ggctctcccg ctggttcggc
721 aagccatccc ctttgctttt acaatacagt gtgaaagaga agaggaggta ggggccaagc
781 ccccacccca tcccactccc cttccctccc cagatattta tgtgaaatga actgcagctt
841 tattttttga aataaaaact tttaaaaagc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
901 aaaa
//