LOCUS BC004446 1166 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens chromosome 20 open reading frame 24, mRNA (cDNA clone MGC:4099 IMAGE:2819807), complete cds. ACCESSION BC004446 VERSION BC004446.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1166) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1166) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: i Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41327697 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..1166 /db_xref="H-InvDB:HIT000031952" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4099 IMAGE:2819807" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1166 /gene="C20orf24" /gene_synonym="PNAS-11" /gene_synonym="RIP5" /db_xref="GeneID:55969" /db_xref="HGNC:HGNC:15870" CDS 144..407 /gene="C20orf24" /gene_synonym="PNAS-11" /gene_synonym="RIP5" /codon_start=1 /product="C20orf24 protein" /protein_id="AAH04446.1" /db_xref="GeneID:55969" /db_xref="HGNC:HGNC:15870" /translation="MSGGRRKEEPPQPQLANGALKVSVWSKVLRSDAAWEDKDEFLDV IYWFRQIIAVVLGVIWGVLPLRGFLGIAGKGHCCSGAVCVCDD" BASE COUNT 279 a 284 c 306 g 297 t ORIGIN 1 aggttgtgag gaaccgcagc gcgccgcagg accgggccgc tgagcctgca gccgccccgc 61 gccgtgacct gcgaccctag accccgactc cctttggctc agcccgcgcg ccccaggccc 121 ggcccgggcg gcgcgacggg aggatgagcg gcgggcggcg gaaggaggag ccgcctcagc 181 cgcagctggc caacggggcc ctcaaagtct ccgtctggag taaggtgctg cggagcgacg 241 cggcctggga ggataaggat gaatttttag atgtgatcta ctggttccga cagatcattg 301 ctgtggtcct gggtgtcatt tggggagttt tgccattacg agggttcttg ggaatagcag 361 ggaaaggcca ttgctgctct ggagctgtgt gtgtgtgtga tgactaaagc aaagaagcag 421 ccctacagtg gcactcctgg gtctggtgca ccactcctca ggagcatctc agattctgcc 481 tgatcaatgc aggagtcctg tacctctact tcagcaatta cctacagatt gatgaggaag 541 aatatggtgg cacgtgggag ctcacgaagg aagggtttat gacctctttt gccttgttca 601 tggtcatttg gatcatcttt tacactgcca tccattatga ctgatggtgt acagctccca 661 agtgctccct atccagtcca aaggaccctc ttgattacag cacaggaact tgatcgttgg 721 ggaaccccag ccccttggaa cttggaagac ccgtgtttcc tggaccgcga atcagtgtgt 781 tgggcatcag tgttttctgc aagggttgtg acctgaaact ttttaaaaac cacccacctt 841 tggggaagca tttctgaatt tatccatcac caaccatttc ttcttggata ccatcaagta 901 acagctatta tttgccaagt ggagctgtca tttaatttga tgcacctctg gattcagatg 961 aaacattaaa ttgtcttcct cgattctcca tcgggtgtag agtttttaaa ctatcaatgg 1021 catttcaagt cttctgaaac agcatggctg tatgtgcgtg gtccatagca cagtacatgc 1081 agcatctaat aagagtttcc attgtagaat gttttcacat acttgaataa atcaaatctt 1141 taattgagaa aaaaaaaaaa aaaaaa //