LOCUS BC004342 948 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens peptidase (mitochondrial processing) alpha, mRNA (cDNA
clone IMAGE:3632957), partial cds.
ACCESSION BC004342
VERSION BC004342.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 948)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 948)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: g Column: 22.
FEATURES Location/Qualifiers
source 1..948
/db_xref="H-InvDB:HIT000086345"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3632957"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..948
/gene="PMPCA"
/gene_synonym="Alpha-MPP"
/gene_synonym="KIAA0123"
/db_xref="GeneID:23203"
CDS <1..433
/gene="PMPCA"
/gene_synonym="Alpha-MPP"
/gene_synonym="KIAA0123"
/codon_start=2
/product="PMPCA protein"
/protein_id="AAH04342.1"
/db_xref="GeneID:23203"
/translation="SYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELER
AKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKM
LRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR"
misc_feature 2..367
/gene="PMPCA"
/gene_synonym="Alpha-MPP"
/gene_synonym="KIAA0123"
/note="PqqL; Region: Predicted Zn-dependent peptidases
[General function prediction only]"
/db_xref="CDD:COG0612"
BASE COUNT 227 a 264 c 287 g 170 t
ORIGIN
1 cagctacgag gacactggcc tcctttgcat ccatgccagc gccgacccaa gacaggttcg
61 agaaatggta gaaatcatca caaaggagtt tattttaatg ggcggaaccg tggacacggt
121 ggagctggaa cgagccaaga cgcagctgac atcaatgctc atgatgaacc tggaatccag
181 gcctgtgatc ttcgaggatg tggggaggca ggtgctggcc actcgctcca gaaagctgcc
241 gcacgagctg tgcacgctca tccgcaacgt gaagccggaa gatgtgaaga gagtcgcttc
301 taagatgctc cgagggaagc cggcagtggc cgccctgggt gacctgactg acctgcccac
361 gtatgagcac atccagaccg ccctgtcgag taaggacggg cgcctgccca ggacgtaccg
421 gctcttccgg tagaaccgct ccccggcctg acagacccag ggagctgcag ctggagcccg
481 ttcccgtgcg tgttagtttg gacacgaatt tagtctaaaa agctgtctgg ttgtataaat
541 ggtgcaaaca atgtcgccac agcacccacg cggtttgcat tcttttggaa ctcaatgtgc
601 cgatcagtgg agtcagtatc gagcctgacc accgcaagcc aggaagcagg tgaagtgccc
661 agcgctggag tgcagcgtgc cacgaggagg gcggtcggtg cttccctcct cgggctgtgg
721 gcacatgggg ccccgcaggt tccttggagg agccctgagc tgggaggcag caaaggctga
781 cctatcagag cctcccggag gccaccgtgc tgggtaccag gactcacctc tgacaagcag
841 gagaaggtaa gggcccggtc agctccaagg agcgcgctcc acgcgcgtgc acacagcttc
901 cctggtaata aagagctggc atctttctta aaaaaaaaaa aaaaaaaa
//