LOCUS BC004264 3138 bp mRNA linear HUM 01-NOV-2004 DEFINITION Homo sapiens EPH receptor B4, mRNA (cDNA clone IMAGE:3611312), partial cds. ACCESSION BC004264 VERSION BC004264.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3138) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3138) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 13 Row: m Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..3138 /db_xref="H-InvDB:HIT000086314" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3611312" /tissue_type="Pancreas, adenocarcinoma" /clone_lib="NIH_MGC_39" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..3138 /gene="EPHB4" /gene_synonym="HTK" /gene_synonym="MYK1" /gene_synonym="TYRO11" /db_xref="GeneID:2050" /db_xref="MIM:600011" CDS <1..2540 /gene="EPHB4" /gene_synonym="HTK" /gene_synonym="MYK1" /gene_synonym="TYRO11" /codon_start=3 /product="EPHB4 protein" /protein_id="AAH04264.1" /db_xref="GeneID:2050" /db_xref="MIM:600011" /translation="AEHLTRKRPGAEATGKVNVKTLRLGPLSKAGFYLAFQDQGACMA LLSLHLFYKKCAQLTVNLTRFPETVPRELVVPVAGSCVVDAVPAPGPSPSLYCREDGQ WAEQPVTGCSCAPGFEAAEGNTKCRACAQGTFKPLSGEGSCQPCPANSHSNTIGSAVC QCRVGYFRARTDPRGAPCTTPPSAPRSVVSRLNGSSLHLEWSAPLESGGREDLTYALR CRECRPGGSCAPCGGDLTFDPGPRDLVEPWVVVRGLRPDFTYTFEVTALNGVSSLATG PVPFEPVNVTTDREVPPAVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGA EGPSSVRFLKTSENRAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDESEGW REQLALIAGTAVVGVVLVLVVIVVAVLCLRKQSNGREAEYSDKHGQYLIGHGTKVYID PFTYEDPNEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK GGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN DGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLE ENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM SNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPA SLKIVARENGGASHPLLDQRQPHYSAFGSVGEWLRAIKMGRYEESFAAAGFGSFELVS QISAEDLLRIGVTLAGHQKKILASVQHMKSQAKPGTPGGTGGPAPQY" BASE COUNT 667 a 946 c 947 g 578 t ORIGIN 1 ccgcggagca tctcacccgg aagcgccctg gggccgaggc caccgggaag gtgaatgtca 61 agacgctgcg tctgggaccg ctcagcaagg ctggcttcta cctggccttc caggaccagg 121 gtgcctgcat ggccctgcta tccctgcacc tcttctacaa aaagtgcgcc cagctgactg 181 tgaacctgac tcgattcccg gagactgtgc ctcgggagct ggttgtgccc gtggccggta 241 gctgcgtggt ggatgccgtc cccgcccctg gccccagccc cagcctctac tgccgtgagg 301 atggccagtg ggccgaacag ccggtcacgg gctgcagctg tgctccgggg ttcgaggcag 361 ctgaggggaa caccaagtgc cgagcctgtg cccagggcac cttcaagccc ctgtcaggag 421 aagggtcctg ccagccatgc ccagccaata gccactctaa caccattgga tcagccgtct 481 gccagtgccg cgtcgggtac ttccgggcac gcacagaccc ccggggtgca ccctgcacca 541 cccctccttc ggctccgcgg agcgtggttt cccgcctgaa cggctcctcc ctgcacctgg 601 aatggagtgc ccccctggag tctggtggcc gagaggacct cacctacgcc ctccgctgcc 661 gggagtgccg acccggaggc tcctgtgcgc cctgcggggg agacctgact tttgaccccg 721 gcccccggga cctggtggag ccctgggtgg tggttcgagg gctacgtcct gacttcacct 781 atacctttga ggtcactgca ttgaacgggg tatcctcctt agccacgggg cccgtcccat 841 ttgagcctgt caatgtcacc actgaccgag aggtacctcc tgcagtgtcc gacatccggg 901 tgacgcggtc ctcacccagc agcttgagcc tggcctgggc tgttccccgg gcacccagtg 961 gggctgtgct ggactacgag gtcaaatacc atgagaaggg cgccgagggt cccagcagcg 1021 tgcggttcct gaagacgtca gaaaaccggg cagagctgcg ggggctgaag cggggagcca 1081 gctacctggt gcaggtacgg gcgcgctctg aggccggcta cgggcccttc ggccaggaac 1141 atcacagcca gacccaactg gatgagagcg agggctggcg ggagcagctg gccctgattg 1201 cgggcacggc agtcgtgggt gtggtcctgg tcctggtggt cattgtggtc gcagttctct 1261 gcctcaggaa gcagagcaat gggagagaag cagaatattc ggacaaacac ggacagtatc 1321 tcatcgggca tggtactaag gtctacatcg accccttcac ttatgaagac cctaatgagg 1381 ctgtgaggga atttgcaaaa gagatcgatg tctcctacgt caagattgaa gaggtgattg 1441 gtgcaggtga gtttggcgag gtgtgccggg ggcggctcaa ggccccaggg aagaaggaga 1501 gctgtgtggc aatcaagacc ctgaagggtg gctacacgga gcggcagcgg cgtgagtttc 1561 tgagcgaggc ctccatcatg ggccagttcg agcaccccaa tatcatccgc ctggagggcg 1621 tggtcaccaa cagcatgccc gtcatgattc tcacagagtt catggagaac ggcgccctgg 1681 actccttcct gcggctaaac gacggacagt tcacagtcat ccagctcgtg ggcatgctgc 1741 ggggcatcgc ctcgggcatg cggtaccttg ccgagatgag ctacgtccac cgagacctgg 1801 ctgctcgcaa catcctagtc aacagcaacc tcgtctgcaa agtgtctgac tttggccttt 1861 cccgattcct ggaggagaac tcttccgatc ccacctacac gagctccctg ggaggaaaga 1921 ttcccatccg atggactgcc ccggaggcca ttgccttccg gaagttcact tccgccagtg 1981 atgcctggag ttacgggatt gtgatgtggg aggtgatgtc atttggggag aggccgtact 2041 gggacatgag caatcaggac gtgatcaatg ccattgaaca ggactaccgg ctgcccccgc 2101 ccccagactg tcccacctcc ctccaccagc tcatgctgga ctgttggcag aaagaccgga 2161 atgcccggcc ccgcttcccc caggtggtca gcgccctgga caagatgatc cggaaccccg 2221 ccagcctcaa aatcgtggcc cgggagaatg gcggggcctc acaccctctc ctggaccagc 2281 ggcagcctca ctactcagct tttggctctg tgggcgagtg gcttcgggcc atcaaaatgg 2341 gaagatacga agaaagtttc gcagccgctg gctttggctc cttcgagctg gtcagccaga 2401 tctctgctga ggacctgctc cgaatcggag tcactctggc gggacaccag aagaaaatct 2461 tggccagtgt ccagcacatg aagtcccagg ccaagccggg aaccccgggt gggacaggag 2521 gaccggcccc gcagtactga cctgcaggaa ctccccaccc cagggacacc gcctccccat 2581 tttccggggc agagtgggga ctcacagagg cccccagccc tgtgccccgc tggattgcac 2641 tttgagcccg tggggtgagg agttggcaat ttggagagac aggatttggg ggttctgcca 2701 taataggagg ggaaaatcac cccccagcca cctcggggaa ctccagacca agggtgaggg 2761 cgcctttccc tcaggactgg gtgtgaccag aggaaaagga agtgcccaac atctcccagc 2821 ctccccaggt gcccccctca ccttgatggg tgcgttcccg cagaccaaag agagtgtgac 2881 tcccttgcca gctccagagt gggggggctg tcccaggggg caagaagggg tgtcagggcc 2941 cagtgacaaa atcattgggg tttgtagtcc caacttgctg ctgtcaccac caaactcaat 3001 catttttttc ccttgtaaat gcccctcccc cagctgctgc cttcatattg aaggtttttg 3061 agttttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3121 aaaaaaaaaa aaaaaaaa //