LOCUS BC003152 2019 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member 1, mRNA (cDNA clone MGC:4062 IMAGE:2958651), complete cds. ACCESSION BC003152 VERSION BC003152.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2019) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2019) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC003152.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: p Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147669. FEATURES Location/Qualifiers source 1..2019 /db_xref="H-InvDB:HIT000031470" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4062 IMAGE:2958651" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2019 /gene="SLC39A1" /gene_synonym="ZIP1" /db_xref="GeneID:27173" /db_xref="HGNC:HGNC:12876" /db_xref="MIM:604740" CDS 34..1008 /gene="SLC39A1" /gene_synonym="ZIP1" /codon_start=1 /product="solute carrier family 39 (zinc transporter), member 1" /protein_id="AAH03152.1" /db_xref="GeneID:27173" /db_xref="HGNC:HGNC:12876" /db_xref="MIM:604740" /translation="MGPWGEPELLVWRPESVASEPPVPVGLEVKLGALVLLLVLTLLC SLVPICVLRRPGANHEGSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAA LHVTLQFPLQEFILAMGFFLVLVMEQITLAYKEQSGPSPLEETRALLGTVNGGPQHWH DGPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHK GILAVSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAALAESAGPLHQLAQSVLE GMAAGTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI" BASE COUNT 425 a 539 c 588 g 467 t ORIGIN 1 ggtctgagag tcactggagc taccagaagc atcatggggc cctggggaga gccagagctc 61 ctggtgtggc gccccgagtc ggtagcttca gagcctccag tgcctgtggg gctggaggtg 121 aagttggggg ccctggtgct gctgctggtg ctcaccctcc tctgcagcct ggtgcccatc 181 tgtgtgctgc gccggccagg agctaaccat gaaggctcag cttcccgcca gaaagccctg 241 agcctagtaa gctgtttcgc ggggggcgtc tttttggcca cttgtctcct ggacctgctg 301 cctgactacc tggctgccat agatgaggcc ctggcagcct tgcacgtgac gctccagttc 361 ccactgcaag agttcatcct ggccatgggc ttcttcctgg tcctggtgat ggagcagatc 421 acactggctt acaaggagca gtcagggccg tcacctctgg aggaaacaag ggctctgctg 481 ggaacagtga atggtgggcc gcagcattgg catgatgggc caggggtccc acaggcgagt 541 ggagccccag caaccccctc agccttgcgt gcctgtgtac tggtgttctc cctggccctc 601 cactccgtgt tcgaggggct ggcggtaggg ctgcagcgag accgggctcg ggccatggag 661 ctgtgcctgg ctttgctgct ccacaagggc atcctggctg tcagcctgtc cctgcggctg 721 ttgcagagcc accttagggc acaggtggtg gctggctgtg ggatcctctt ctcatgcatg 781 acacctctag gcatcgggct gggtgcagct ctggcagagt cggcaggacc tctgcaccag 841 ctggcccagt ctgtgctaga gggcatggca gctggcacct ttctctatat cacctttctg 901 gaaatcctgc cccaggagct ggccagttct gagcaaagga tcctcaaggt cattctgctc 961 ctagcaggct ttgccctgct cactggcctg ctcttcatcc aaatctaggg ggcttcaaga 1021 gaggggcagg ggagattgat gatcaggtgc ccctgttctc ccttccctcc cccagttgtg 1081 gggaatagga aggaaagggg aagggaaata ctgaggacca aaaagttctc tgggagctaa 1141 agatagagcc tttggggcta tctgactaat gagagggaag tgggcagaca agaggctggc 1201 cccagtccca aggaacaaga gatggtcaag tcgctagaga catatcaggg gacattagga 1261 ttggggaaga cacttgactg ctagaatcag aggttggaca ctatacataa ggacaggctc 1321 acatgggagg ctggaggtgg gtacccagct gctgtggaac gggtatggag aggtcataaa 1381 cctagagtca gtgtcctgtt ggtcctagcc catttcagca ccctgccact tggagtggac 1441 ccctcctact cttcttagcg cctaccctca tacctatctc cctcctccca tctcctaggg 1501 gactggcgcc aaatggtctc tccctgccaa ttttggtatc ttctctggcc tctccagtcc 1561 tgcttactcc tctattttta aagtgccaaa caaatcccct tcctctttct caaagcacag 1621 taatgtggca ctgagcccta cccagcacct cagtgaaggg ggcctgcttg ctctttattt 1681 tggtcccgga tcctggggtg gggcagaaat attttctggg ctggggtagg aggaaggttg 1741 ttgcagccat ctactgctgc tgtaccctag gaatatgggg acatggacat ggtgtcccat 1801 gcccagatga taaacactga gctgccaaaa cattttttta aatacacccg aggagcccaa 1861 gggggaaggg caatgcctac ccccagcgtt atttttgggg agggagggct gtgcataggg 1921 acatattctt tagaatctat tttattaact gacctgtttt gggacctgtt acccaaataa 1981 aagatgtttc tagaaaaaaa aaaaaaaaaa aaaaaaaaa //