LOCUS BC003036 1465 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens secretagogin, EF-hand calcium binding protein, mRNA (cDNA clone MGC:4356 IMAGE:2822613), complete cds. ACCESSION BC003036 VERSION BC003036.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1465) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1465) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: j Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 59814903. FEATURES Location/Qualifiers source 1..1465 /db_xref="H-InvDB:HIT000031377" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4356 IMAGE:2822613" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1465 /gene="SCGN" /gene_synonym="DJ501N12.8" /gene_synonym="SECRET" /gene_synonym="SEGN" /gene_synonym="setagin" /db_xref="GeneID:10590" /db_xref="HGNC:HGNC:16941" /db_xref="MIM:609202" CDS 171..1001 /gene="SCGN" /gene_synonym="DJ501N12.8" /gene_synonym="SECRET" /gene_synonym="SEGN" /gene_synonym="setagin" /codon_start=1 /product="secretagogin, EF-hand calcium binding protein" /protein_id="AAH03036.1" /db_xref="GeneID:10590" /db_xref="HGNC:HGNC:16941" /db_xref="MIM:609202" /translation="MDSSREPTLGRLDAAGFWQVWQRFDADEKGYIEEKELDAFFLHM LMKLGTDDTVMKANLHKVKQQFMTTQDASKDGRIRMKELAGMFLSEDENFLLLFRREN PLDSSVEFMQIWRKYDADSSGFISAAELRNFLRDLFLHHKKAISEAKLEEYTGTMMKI FDRNKDGRLDLNDLARILALQENFLLQFKMDACSTEERKRDFEKIFAYYDVSKTGALE GPEVDGFVKDMMELVQPSISGVDLDKFREILLRHCDVNKDGKIQKSELALCLGLKINP " BASE COUNT 379 a 330 c 368 g 388 t ORIGIN 1 gctcagcgac gccacggcca gcagcgctcg cgtcctcccc agcaacagtt actcaaagct 61 aatcagatag cgaaagaagc aggagagcaa gtcaagaaat acggtgaaga gtccttccca 121 aagttgtcta ggtccttccg cgccggtgcc tggtcttcgt cgtcaacacc atggacagct 181 cccgggaacc gactctgggg cgcttggacg ccgctggctt ctggcaggtc tggcagcgct 241 ttgatgcgga tgaaaaaggt tacatagaag agaaggaact cgatgctttc tttctccaca 301 tgttgatgaa actgggtact gatgacacgg tcatgaaagc aaatttgcac aaggtgaaac 361 agcagtttat gactacccaa gatgcctcta aagatggtcg cattcggatg aaagagcttg 421 ctggtatgtt cttatctgag gatgaaaact ttcttctgct ctttcgccgg gaaaacccac 481 tggacagcag cgtggagttt atgcagattt ggcgcaaata tgacgctgac agcagtggct 541 ttatatcagc tgctgagctc cgcaacttcc tccgagacct ctttcttcac cacaaaaagg 601 ccatttctga ggctaaactg gaagaataca ctggcaccat gatgaagatt tttgacagaa 661 ataaagatgg tcggttggat ctaaatgact tagcaaggat tctggctctt caggaaaact 721 tccttctcca atttaaaatg gatgcttgtt ctactgaaga aaggaaaagg gactttgaga 781 aaatctttgc ctactatgat gttagtaaaa caggagccct ggaaggccca gaagtggatg 841 ggtttgtcaa agacatgatg gagcttgtcc agcccagcat cagcggggtg gaccttgata 901 agttccgcga gattctcctg cgtcactgcg acgtgaacaa ggatggaaaa attcagaagt 961 ctgagctggc tttgtgtctt gggctgaaaa tcaacccata atcccagact gctttgcctt 1021 ttgctcttac tatgtttctg tgatcttgct ggtagaattg tatctgtgca ttgatgttgg 1081 gaacacagtg ggcaaactca caaatggtgt gctattcttg ggcaagaaga gggacgctag 1141 ggccttcctt ccaccggcgt gatctatccc tgtctcactg aaagcccctg tgtagtgtct 1201 gtgttgtttt cccttgaccc tgggctttcc tatcctccca aagactcagc tcccctgtta 1261 gatggctctg cctgtccttc cccagtcacc agggtggggg ggacaggggc agctgagtgc 1321 attcattttg tgcttttctt atgggctttc tgcttagtct gaaaggtgtg tggcattcat 1381 ggcaatcctg taacttcaac atagattttt tttgtgtgtg tggaaataaa tctgcaattg 1441 gaaacaaaaa aaaaaaaaaa aaaaa //