LOCUS BC002896 2432 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens zinc finger, matrin type 3, mRNA (cDNA clone MGC:10613
IMAGE:3943641), complete cds.
ACCESSION BC002896
VERSION BC002896.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2432)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2432)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC002896.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23199979.
FEATURES Location/Qualifiers
source 1..2432
/db_xref="H-InvDB:HIT000031272"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10613 IMAGE:3943641"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2432
/gene="ZMAT3"
/gene_synonym="FLJ12296"
/gene_synonym="MGC10613"
/gene_synonym="PAG608"
/gene_synonym="WIG-1"
/gene_synonym="WIG1"
/db_xref="GeneID:64393"
/db_xref="HGNC:HGNC:29983"
/db_xref="MIM:606452"
CDS 260..1129
/gene="ZMAT3"
/gene_synonym="FLJ12296"
/gene_synonym="MGC10613"
/gene_synonym="PAG608"
/gene_synonym="WIG-1"
/gene_synonym="WIG1"
/codon_start=1
/product="zinc finger, matrin type 3"
/protein_id="AAH02896.1"
/db_xref="GeneID:64393"
/db_xref="HGNC:HGNC:29983"
/db_xref="MIM:606452"
/translation="MILLQHAVLPPPKQPSPSPPMSVATRSTGTLQLPPQKPFGQEAS
LPLAGEEELSKGGEQDCALEELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYY
AANSCPPPARMSNVVEPAATPVVPVPPQMGSFKPGGRVILATENDYCKLCDASFSSPA
VAQAHYQGKNHAKRLRLAEAQSNSFSESSELGQRRARKEGNEFKMMPNRRNMYTVQNN
SAGPYFNPRSRQRIPRDLAMCVTPSGQFYCSMCNVGAGEEMEFRQHLESKQHKSKVSE
QRYRNEMENLGYV"
BASE COUNT 603 a 574 c 615 g 640 t
ORIGIN
1 agctgtttcc ctgtgggtcg ggttggactg acttttgaca gtcagccttc ggctgcggag
61 ggggctcggc ggcggccggc ggagaaagtt gctccgagaa gaggctgggt cgagctgggc
121 cgagccgggc gcgcagggcg ggcgtcgcgg gcgtcccggg cggacgcggc gcggagactg
181 ccggcgcgtc ccgggggttc cgatttgaag accttgcttc tcatcaccca ctggattatg
241 ccccaggctt ccctacccaa tgatcctctt gcaacacgcc gtgcttcctc cacctaagca
301 gccctcaccc tcgcctccta tgtcagtggc caccaggtct acaggaacct tgcagcttcc
361 accacagaag ccttttgggc aggaggcttc cttgcctctt gcaggggaag aagagttatc
421 gaagggaggg gagcaagact gtgccctgga ggagctatgt aagcccctgt actgcaaact
481 ctgcaatgtc accttgaact ctgcacagca agcccaggct cattatcagg gtaaaaatca
541 tggtaagaaa ctccgaaatt actatgcagc aaatagctgt cctcctcctg ctagaatgag
601 caatgtggtc gagcctgcag ctactccagt tgttccagtc cctccgcaga tgggctcctt
661 taagccagga ggccgagtga tcctggccac ggagaatgat tactgtaagc tctgtgatgc
721 ctccttcagt tccccagctg tggctcaggc tcactatcaa gggaagaatc atgccaagag
781 gctgcggctg gcggaagctc agagtaactc attctcggaa tcctcagagc tgggtcaacg
841 gcgggccagg aaagaaggga atgagtttaa gatgatgcct aacaggagaa atatgtatac
901 agtacagaat aattcagcag gtccttactt caatccccgc tctcggcaga gaattccacg
961 tgatctggcc atgtgtgtta ctccaagtgg ccagttttac tgctcaatgt gtaatgttgg
1021 agctggcgaa gagatggaat tccggcagca tttagagagc aagcaacata agagcaaggt
1081 gtctgaacag cggtacagga atgagatgga gaatctggga tatgtatagt gattatcata
1141 ttaagataga gcagcttttc ctgcctgttg tttgcctttt gtcaacttgc cctgctttgt
1201 ggtctttttg atatgagtac attcctctgc ttaatgttaa tacgtgtaac ccacagtggt
1261 accatgagat gtcaaaacct gggggcccgg gggcggggcg gggggaggtg ggtgtgaaga
1321 acgtgcttct taggtcataa cgcttttgca gggtcaatgg tgttgagccg ctcatagcat
1381 gtgacctacc taccccatca gaaataactt tttatcttgc tcaagttctg gtcaactagt
1441 agcctgacgg cttagaactt tgactattta aaagtttcat tttcttttgc aattttagtt
1501 ttatgtactg ttaaagaatt gtactgaatt ctttttagat cacagtaaaa ataggttggc
1561 agagatttca gtttcccagg gcttaaccag aaccgccacc tcaatgcatt gtcagtagaa
1621 tacattatta gaaactgtta aggtctttcc cgggacattt ttttctgcca ttttcttttg
1681 caattgtagt tttatgtact gttaaagaat tgtattgaat tctttttaga tcaaagtaaa
1741 aataggtcag cagagatttc agtttcccag ggcttaacca gaaccgccac ctcaatgcat
1801 tgtcagtagg atacattatt agaaactgtt agggtctttc ccaggacatt tttttttctg
1861 tatcatgtct ccccatcatt gaagcgcaag ttttcttgaa ttcaaatact cccaatgagc
1921 ttgtatactt ccaaacagct aaacttgatt tccatttgtg gatttcacac atataattgc
1981 cgccttcttc cctcctcttt tttcccccct agttgaatca gcttgtctaa caagcccatt
2041 ttcatgcccc agctgtgctg tgggttttcc aagcctcata tttgaatatt caatgagttt
2101 aagatggata tgatttcaaa aaatagggcc gggcgcggtg gctcacgcct gtaatcccag
2161 cactttggga ggccgaagca ggcggatcac gaggtcagga ggtcgagatc atcctggcta
2221 acacagtgaa accccatctc tactaaaaat acaaaacatt agccgggcgt ggtggtgggt
2281 gcctgtagtc ccagctactc tggaggctga ggcaggagaa tggcgtgaac ccgggaggcg
2341 gagcttgcaa tgagccgaga tcgcgccact gcactccagc ctgggtgaca gagcgagact
2401 ccgtctcaaa aaaaaaaaaa aaaaaaaaaa aa
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