LOCUS BC002368 2917 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 2, mRNA (cDNA clone MGC:8500 IMAGE:2822191), complete
cds.
ACCESSION BC002368
VERSION BC002368.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2917)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2917)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC002368.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: h Column: 11.
FEATURES Location/Qualifiers
source 1..2917
/db_xref="H-InvDB:HIT000030835"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8500 IMAGE:2822191"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2917
/gene="PSMD2"
/gene_synonym="MGC14274"
/gene_synonym="P97"
/gene_synonym="S2"
/gene_synonym="TRAP2"
/db_xref="GeneID:5708"
/db_xref="HGNC:HGNC:9559"
/db_xref="MIM:606223"
CDS 2..2728
/gene="PSMD2"
/gene_synonym="MGC14274"
/gene_synonym="P97"
/gene_synonym="S2"
/gene_synonym="TRAP2"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
non-ATPase, 2"
/protein_id="AAH02368.1"
/db_xref="GeneID:5708"
/db_xref="HGNC:HGNC:9559"
/db_xref="MIM:606223"
/translation="MEEGGRDKAPVQPQQSPAAAPGGTDEKPSGKERRDAGDKDKEQE
LSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPH
YGKLKEIYENMAPGENKRFAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVR
HLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLE
KDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDME
LVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALA
RELDIMEPKVPDDIYKTHLENNRFGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLT
DDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGI
VNSGVRNECDPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDS
KSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNH
LGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHFDSKE
KEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEIGAEMALRTFGHLLRYG
EPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNAR
LAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLT
VLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQA
GKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKNPNYDL"
BASE COUNT 721 a 686 c 834 g 676 t
ORIGIN
1 gatggaggag ggaggccggg acaaggcgcc ggtgcagccc cagcagtctc cagcggcggc
61 ccccggcggc acggacgaga agccgagcgg caaggagcgg cgggatgccg gggacaagga
121 caaagaacag gagctgtctg aagaggataa acagcttcaa gatgaactgg agatgctcgt
181 ggaacgacta ggggagaagg atacatccct gtatcgacca gcgctggagg aattgcgaag
241 gcagattcgt tcttctacaa cttccatgac ttcagtgccc aagcctctca aatttctgcg
301 tccacactat ggcaaactga aggaaatcta tgagaacatg gcccctgggg agaataagcg
361 ttttgctgct gacatcatct ccgttttggc catgaccatg agtggggagc gtgagtgcct
421 caagtatcgg ctagtgggct cccaggagga attggcatca tggggtcatg agtatgtcag
481 gcatctggca ggagaagtgg ctaaggagtg gcaggagctg gatgacgcag agaaggtcca
541 gcgggagcct ctgctcactc tggtgaagga aatcgtcccc tataacatgg cccacaatgc
601 agagcatgag gcttgcgacc tgcttatgga aattgagcag gtggacatgc tggagaagga
661 cattgatgaa aatgcatatg caaaggtctg cctttatctc accagttgtg tgaattacgt
721 gcctgagcct gagaactcag ccctactgcg ttgtgccctg ggtgtgttcc gaaagtttag
781 ccgcttccct gaagctctga gattggcatt gatgctcaat gacatggagt tggtagaaga
841 catcttcacc tcctgcaagg atgtggtagt acagaaacag atggcattca tgctaggccg
901 gcatggggtg ttcctggagc tgagtgaaga tgtcgaggag tatgaggacc tgacagagat
961 catgtccaat gtacagctca acagcaactt cttggcctta gctcgggagc tggacatcat
1021 ggagcccaag gtgcctgatg acatctacaa aacccaccta gagaacaaca ggtttggggg
1081 cagtggctct caggtggact ctgcccgcat gaacctggcc tcctcttttg tgaatggctt
1141 tgtgaatgca gcttttggcc aagacaagct gctaacagat gatggcaaca aatggcttta
1201 caagaacaag gaccacggaa tgttgagtgc agctgcatct cttgggatga ttctgctgtg
1261 ggatgtggat ggtggcctca cccagattga caagtacctg tactcctctg aggactacat
1321 taagtcagga gctcttcttg cctgtggcat agtgaactct ggggtccgga atgagtgtga
1381 ccctgctctg gcactgctct cagactatgt tctccacaac agcaacacca tgagacttgg
1441 ttccatcttt gggctaggct tggcttatgc tggctcaaat cgtgaagatg tcctaacact
1501 gctgctgcct gtgatgggag attcaaagtc cagcatggag gtggcaggtg tcacagcttt
1561 agcctgtgga atgatagcag tagggtcctg caatggagat gtaacttcca ctatccttca
1621 gaccatcatg gagaagtcag agactgagct caaggatact tatgctcgtt ggcttcctct
1681 tggactgggt ctcaaccacc tggggaaggg tgaggccatc gaggcaatcc tggctgcact
1741 ggaggttgtg tcagagccat tccgcagttt tgccaacaca ctggtggatg tgtgtgcata
1801 tgcaggctct gggaatgtgc tgaaggtgca gcagctgctc cacatttgta gcgaacactt
1861 tgactccaaa gagaaggagg aagacaaaga caagaaggaa aagaaagaca aggacaagaa
1921 ggaagcccct gctgacatgg gagcacatca gggagtggct gttctgggga ttgcccttat
1981 tgctatgggg gaggagattg gtgcagagat ggcattacga acctttggcc acttgctgag
2041 atatggggag cctacactcc ggagggctgt acctttagca ctggccctca tctctgtttc
2101 aaatccacga ctcaacatcc tggataccct aagcaaattc tctcatgatg ctgatccaga
2161 agtttcctat aactccattt ttgccatggg catggtgggc agtggtacca ataatgcccg
2221 tctggctgca atgctgcgcc agttagctca atatcatgcc aaggacccaa acaacctctt
2281 catggtgcgc ttggcacagg gcctgacaca tttagggaag ggcaccctta ccctctgccc
2341 ctaccacagc gaccggcagc ttatgagcca ggtggccgtg gctggactgc tcactgtgct
2401 tgtctctttc ctggatgttc gaaacattat tctaggcaaa tcacactatg tattgtatgg
2461 gctggtggct gccatgcagc cccgaatgct ggttacgttt gatgaggagc tgcggccatt
2521 gccagtgtct gtccgtgtgg gccaggcagt ggatgtggtg ggccaggctg gcaagccgaa
2581 gactatcaca gggttccaga ctcatacaac cccagtgttg ttggcccacg gggaacgggc
2641 agaattggcc actgaggagt ttcttcctgt tacccccatt ctggaaggtt ttgttatcct
2701 tcggaagaac cccaattatg atctctaagt gaccaccagg ggctctgaac tgcagctgat
2761 gttatcagca ggccatgcat cctgctgcca agggtggaca cggctgcaga cttctggggg
2821 aattgtcgcc tcctgctctt ttgttactga gtgagataag gttgttcaat aaagactttt
2881 atccccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//