LOCUS BC001837 2005 bp mRNA linear HUM 06-NOV-2003
DEFINITION Homo sapiens glioblastoma amplified sequence, mRNA (cDNA clone
MGC:4443 IMAGE:2959662), complete cds.
ACCESSION BC001837
VERSION BC001837.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2005)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2005)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC001837.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: e Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4503936.
FEATURES Location/Qualifiers
source 1..2005
/db_xref="H-InvDB:HIT000030686"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4443 IMAGE:2959662"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2005
/gene="GBAS"
/gene_synonym="NIPSNAP2"
/db_xref="GeneID:2631"
/db_xref="MIM:603004"
CDS 7..867
/gene="GBAS"
/gene_synonym="NIPSNAP2"
/codon_start=1
/product="GBAS protein"
/protein_id="AAH01837.1"
/db_xref="GeneID:2631"
/db_xref="MIM:603004"
/translation="MAARVLRARGAAWAGGLLQRAAPCSLLPRLRTWTSSSNRSREDS
WLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPECLEAYNKICQEVLPKIHE
DKHYPCTLVGTWNTWYGEQDQAVHLWRYEGGYPALTEVMNKLRENKEFLEFRKARSDM
LLSRKNQLLLEFSFWNEPVPRSGPNIYELRSYQLRPGTMIEWGNYWARAIRFRQDGNE
AVGGFFSQIGQLYMVHHLWAYRDLQTREDIRNAAWHKHGWEELVYYTVPLIQEMESRI
MIPLKTSPLQ"
BASE COUNT 657 a 396 c 401 g 551 t
ORIGIN
1 agcaagatgg cggcgcgagt gctgcgcgcc cgcggagcgg cctgggccgg cggcctcctg
61 cagcgggcgg ccccctgcag cctcctgccc aggctccgga catggacatc ttccagcaac
121 agatctcgag aagacagctg gctaaaatcc ttatttgtcc ggaaagttga tccaagaaaa
181 gatgcccact ccaatctcct agccaaaaag gaaacaagca atctatacaa attacagttt
241 cacaatgtta aaccggaatg cctagaagca tacaacaaaa tttgtcaaga ggtgttgcca
301 aagattcacg aagataaaca ctacccttgt actttggtgg ggacttggaa cacgtggtat
361 ggcgagcagg accaagctgt ccacctctgg aggtatgaag gaggctatcc agccctcaca
421 gaagtcatga ataaactcag agaaaataag gaatttttgg aatttcgtaa ggcaagaagt
481 gacatgcttc tctccaggaa gaatcagctc ctgttggagt tcagtttctg gaatgagcct
541 gtgccaagat ccggacctaa tatatatgaa ctcaggtctt accaactccg accaggaacc
601 atgattgaat ggggcaatta ctgggctcgt gcaatccgct tcagacagga tggtaacgaa
661 gccgtcggag gattcttctc tcagattggg cagctgtaca tggtgcacca tctttgggct
721 tacagggatc ttcagaccag ggaagacata cggaatgcag catggcacaa acatggctgg
781 gaggaattgg tatattacac agttccactt attcaggaaa tggaatccag aatcatgatc
841 ccactgaaga cctcgcccct ccagtaaagc tgtagagttt ctatgtgcct acatacattt
901 ctgtgacaag tatttgtcgt aaattaattt taattgtgta tcaagtgaaa aagaaacact
961 gaggttttaa gctgctgtat atagcttgtg agaaacctct tttctttaaa atttacataa
1021 tcacaagaaa ggaaagaatt acagttggac tgattgtgac agtgccttgt cgtcctcttt
1081 gaaacacccc gtgttgtcca gtatacctta taacacttag ccacttctcc ccaccctcca
1141 gaaggggtcc acgttgaatt ctgaatcatc ttgaaaataa gattccaacc acaaaaaaaa
1201 tttagccatt tctttactaa aaaaaaccaa aaaacaaatc tgttttataa tcacagattt
1261 ttagacaaat ttcttgtatc aggaagaaat acaaattttg tcatgtttct caagcagtgt
1321 ttctgaggag gaacaaatta caagtgtacc caataactga aaatgtttta actcactctc
1381 atttgtaagc agtccacata gtagacaatg ggttttccaa gctgggcaag gtacatttaa
1441 tcagtaaatc agtttcacat catgtattgt gatgtttcaa tgtgagacac aaaaacaatg
1501 gcttgaaact tgtgtatcat atgtgatttt gaaatgaaca ccttgaatag cactaatttt
1561 tatttgtggt atttttctat aacaaaacaa gtagctctag gaaaagaggt tttattttgt
1621 aaacgatcat ttgtgacctc agacactctc tggctaatat tttaataagc tcacagcaga
1681 taattctgag atcatgggtg aggggtggtg catgttgaga tttaaattgg cataaagctg
1741 catacttttt gtctagctgt ttgatttcat tttttaatat agtatgccaa ttttgtgact
1801 gttaccatgt gaaagtcctg ttgaaatgaa caattgtctg ccccacaatc aagaatgtat
1861 gtgtaaagtg tgaataaatc tcatatcaaa tgtcaaactt ttacatgtga atgattttct
1921 caaagaacat agaaaagtca ataaaatcct cttaatttcc acaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaa
//